Evidence map›Paper›PMID 17450416›Full record

ArticlePlant molecular biology2007

Chloroplast ribosome release factor 1 (AtcpRF1) is essential for chloroplast development.

Reiko Motohashi, Takanori Yamazaki, Fumiyoshi Myouga, Takuya Ito, Koichi Ito, Masakazu Satou, Masatomo Kobayashi, Noriko Nagata, Shigeo Yoshida, Akitomo Nagashima and 3 more

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Article in Plant molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 59 citations in OpenAlex.

  1. A multiplant transcriptomic atlas reveals conserved and lineage-specific defense architectures in response toProceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Reiko MotohashiFaculty of Agriculture, University of Shizuoka, 836 Ohya, Suruga-ku, Shizuoka, 422-8529, Japan. motohasi@agr.shizuoka.ac.jp
Takanori Yamazaki
Fumiyoshi Myouga
Takuya Ito
Koichi Ito
Masakazu Satou
Masatomo Kobayashi
Noriko Nagata
Shigeo Yoshida
Akitomo Nagashima
Kan Tanaka
Seiji Takahashi
Kazuo Shinozaki
RIKEN Center for Sustainable Resource Science · JPThe University of Tokyo · JPRIKEN BioResource Research Center · JPTohoku University · JPUniversity of Shizuoka · JPUniversity of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To study the functions of nuclear genes involved in chloroplast development, we systematically analyzed albino and pale green Arabidopsis thaliana mutants by use of the Activator/Dissociation (Ac/Ds) transposon tagging system. In this study, we focused on one of these albino mutants, designated apg3-1 (for a lbino or p ale g reen mutant 3). A gene encoding a ribosome release factor 1 (RF1) homologue was disrupted by the insertion of a Ds transposon into the APG3 gene; a T-DNA insertion into the same gene caused a similar phenotype (apg3-2). The APG3 gene (At3g62910) has 15 exons and encodes a protein (422-aa) with a transit peptide that functions in targeting the protein to chloroplasts. The amino acid sequence of APG3 showed 40.6% homology with an RF1 of Escherichia coli, and complementation analysis using the E. coli rf1 mutant revealed that APG3 functions as an RF1 in E. coli, although complementation was not successful in the RF2-deficient (rf2) mutants of E. coli. These results indicate that the APG3 protein is an orthologue of E. coli RF1, and is essential for chloroplast translation machinery; it was accordingly named AtcpRF1. Since the chloroplasts of apg3-1 plants contained few internal thylakoid membranes, and chloroplast proteins related to photosynthesis were not detected by immunoblot analysis, AtcpRF1 is thought to be essential for chloroplast development.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsChloroplast ProteinsChloroplastsDNA, PlantMolecular Sequence DataMutationOligonucleotide Array Sequence AnalysisPhotosynthesisProtein BiosynthesisReverse Transcriptase Polymerase Chain ReactionRibosomesRNA, PlantArabidopsis ProteinsChloroplast ProteinsDNA, PlantRNA, PlantRRF protein, Arabidopsis

Identifiers

PMID17450416
OpenAlexW2079589973

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.