ArticleApplied and environmental microbiology2007
Genomic and phenotypic diversity of coastal Vibrio cholerae strains is linked to environmental factors.
Article in Applied and environmental microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.
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Who cites it
43 citing papers in PubMed.
- Defence systems encoded by core genomic islands of seventh pandemicPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025Review
- Exploring Mobile Genetic Elements in Vibrio cholerae.Genome biology and evolution · 2025Article
- Vibrio cholerae-An emerging pathogen in Austrian bathing waters?Wiener klinische Wochenschrift · 2023Review
- Environmental Reservoirs of Pathogenic Vibrio spp. and Their Role in Disease: The List Keeps Expanding.Advances in experimental medicine and biology · 2023Review
- Genomic dissection of theMicrobial genomics · 2022Article
- Article
- The VarA-CsrA regulatory pathway influences cell shape in Vibrio cholerae.PLoS genetics · 2022Article
- Getting ahead of the competition.Nature reviews. Microbiology · 2021Article
- Genomic contextualisation of ancient DNA molecular data from an Argentinian fifth pandemicMicrobial genomics · 2021Article
- Article
- Interbacterial competition and anti-predatory behaviour of environmental Vibrio cholerae strains.Environmental microbiology · 2020Article
- Neighbor predation linked to natural competence fosters the transfer of large genomic regions ineLife · 2019Article
- DNA-uptake pili of Vibrio cholerae are required for chitin colonization and capable of kin recognition via sequence-specific self-interaction.Nature microbiology · 2019Article
- Long-Read-Based Genome Sequences of Pandemic and Environmental Vibrio cholerae Strains.Microbiology resource announcements · 2018Article
- Bacterial symbionts use a type VI secretion system to eliminate competitors in their natural host.Proceedings of the National Academy of Sciences of the United States of America · 2018Article
- Molecular insights into Vibrio cholerae's intra-amoebal host-pathogen interactions.Nature communications · 2018Article
- Acclimation of Culturable Bacterial Communities under the Stresses of Different Organic Compounds.Frontiers in microbiology · 2018Article
- A Small Number of Phylogenetically Distinct Clonal Complexes Dominate a Coastal Vibrio cholerae Population.Applied and environmental microbiology · 2016Article
- Comparative genomic and phenomic analysis of Clostridium difficile and Clostridium sordellii, two related pathogens with differing host tissue preference.BMC genomics · 2015Article
- iTRAQ-based proteomic profiling of Vibrio parahaemolyticus under various culture conditions.Proteome science · 2015Article
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4 authors.
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Abstract
Studies of Vibrio cholerae diversity have focused primarily on pathogenic isolates of the O1 and O139 serotypes. However, autochthonous environmental isolates of this species routinely display more extensive genetic diversity than the primarily clonal pathogenic strains. In this study, genomic and metabolic profiles of 41 non-O1/O139 environmental isolates from central California coastal waters and four clinical strains are used to characterize the core genome and metabolome of V. cholerae. Comparative genome hybridization using microarrays constructed from the fully sequenced V. cholerae O1 El Tor N16961 genome identified 2,787 core genes that approximated the projected species core genome within 1.6%. Core genes are almost universally present in strains with widely different niches, suggesting that these genes are essential for persistence in diverse aquatic environments. In contrast, the dispensable genes and phenotypic traits identified in this study should provide increased fitness for certain niche environments. Environmental parameters, measured in situ during sample collection, are correlated to the presence of specific dispensable genes and metabolic capabilities, including utilization of mannose, sialic acid, citrate, and chitosan oligosaccharides. These results identify gene content and metabolic pathways that are likely selected for in certain coastal environments and may influence V. cholerae population structure in aquatic environments.
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