Evidence map›Paper›PMID 17449630›Full record

ArticleJournal of bacteriology2007

Structure-based functional analysis of the replication protein of plasmid R6K: key amino acids at the pi/DNA interface.

Selvi Kunnimalaiyaan, Sheryl A Rakowski, Marcin Filutowicz

Abstract read
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Selvi KunnimalaiyaanDepartment of Bacteriology, University of Wisconsin, 420 Henry Mall, Madison, WI 53706, USA.
Sheryl A Rakowski
Marcin Filutowicz

Funding

ROLE OF NUCLEOPROTEIN STRUCTURES IN GENOME DUPLICATIONR01GM040314 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI FILUTOWICZ, MARCIN S · 1989 to 2002
$816k
NIGMS NIH HHS GM 40314NIGMS NIH HHS R01 GM040314
6 · The paper itself

Abstract

In previous work, we characterized the bases in an iteron of plasmid R6K that are important for the binding of pi protein monomers and dimers. Here we investigate the following six amino acids of pi, encoded by pir, hypothesized to be important for DNA contact: Ser71, Try74, Gly131, Gly211, Arg225, and Arg254.

Indexed as

Amino AcidsDimerizationDNADNA-Binding ProteinsDNA ReplicationModels, GeneticModels, MolecularMutationPlasmidsProtein BindingRepliconAmino AcidsDNADNA-Binding Proteins

Identifiers

PMID17449630
PMCPMC1913429

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.