ArticlePlant molecular biology2007
Genome-wide identification and expression analysis of rice cell cycle genes.
Article in Plant molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.
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Who cites it
46 citing papers in PubMed, 121 citations in OpenAlex.
- Whole-Genome Analysis of the Cell Cycle Regulators in Soybean: Evolution, Expansion, and Functional Implications.Biology · 2026Article
- EMF2b-1 regulates endosperm cell cycling through PRC2 recruitment in maize.Genome biology · 2026Article
- Identification of E2F/DP gene family and their expression analysis under cold stress in rice.Frontiers in plant science · 2026Article
- Genome Wide Identification and Characterization ofInternational journal of genomics · 2026Article
- Genome-wide characterization of the cotton E2F/DP gene family and a negative role of GhDEL1_D08 in salt tolerance.BMC plant biology · 2025Article
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- Comprehensive identification of maize ZmE2F transcription factors and the positive role of ZmE2F6 in response to drought stress.BMC genomics · 2024Article
- The roles of a novel CDKB/KRP/FB3 cell cycle core complex in rice gametes and initiation of embryogenesis.Plant reproduction · 2023Article
- The miR167-OsARF12 module regulates rice grain filling and grain size downstream of miR159.Plant communications · 2023Article
- Genome-wide identification, evolutionary and expression analysis of the cyclin-dependent kinase gene family in peanut.BMC plant biology · 2023Article
- Characterization of the soybean KRP gene family reveals a key role for GmKRP2a in root development.Frontiers in plant science · 2023Article
- ABERRANT PANICLE ORGANIZATION2 controls multiple steps in panicle formation through common direct-target genes.Plant physiology · 2022Article
- Global leaf and root transcriptome in response to cadmium reveals tolerance mechanisms in Arundo donax L.BMC genomics · 2022Article
- The B-Type Cyclin CYCB1-1 Regulates Embryonic Development and Seed Size in Maize.International journal of molecular sciences · 2022Article
- E2Fs co-participate in cadmium stress response through activation of MSHs during the cell cycle.Frontiers in plant science · 2022Article
- Phenotypic, Transcriptomic, and Metabolomic Signatures of Root-Specifically OverexpressedFrontiers in plant science · 2020Article
- Cyclin-Dependent Kinase Inhibitors KRP1 and KRP2 Are Involved in Grain Filling and Seed Germination in Rice (International journal of molecular sciences · 2019Article
- Whole Genome Analysis of Cyclin Dependent Kinase (International journal of molecular sciences · 2018Article
- A Pelota-like gene regulates root development and defence responses in rice.Annals of botany · 2018Article
Corrections and comments
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Authors and funding
4 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Cyclins, cyclin-dependent kinases, and a number of other proteins control the progression of plant cell cycle. Although extensive studies have revealed the roles of some cell cycle regulators and the underlying mechanisms in Arabidopsis, relatively a small number of cell cycle regulators were functionally analyzed in rice. In this study, we describe 41 regulators in the rice genome. Our results indicate that the rice genome contains a less number of the core cell cycle regulators than the Arabidopsis one does, although the rice genome is much larger than the Arabidopsis one. Eight groups of CDKs similar to those in Arabidopsis were identified in the rice genome through phylogenetic analysis, and the corresponding members in the different groups include E2F, CKI, Rb, CKS and Wee. The structures of the core cell regulators were relatively conserved between the rice and Arabidopsis genomes. Furthermore, the expression of the majority of the core cell cycle genes was spatially regulated, and the most closely related ones showed very similar patterns of expression, suggesting functional redundancy and conservation between the highly similar core cell cycle genes in rice and Arabidopsis. Following auxin or cytokinin treatment, the expression of the core cell cycle genes was either upregulated or downregulated, suggesting that auxin and/or cytokinin may directly regulate the expression of the core cell cycle genes. Our results provide basic information to understand the mechanism of cell cycle regulation and the functions of the rice cell cycle genes.
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