Evidence map›Paper›PMID 17441504›Full record

ArticleCell stress & chaperones2007

GroEL/S substrate specificity based on substrate unfolding propensity.

Kristin N Parent, Carolyn M Teschke

Abstract read
In one paragraph

Article in Cell stress & chaperones, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Kristin N ParentDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, CT 06269, USA.
Carolyn M Teschke
University of Connecticut · US

Funding

FOLDING OF PHAGE P22 STRUCTURAL PROTEINSR01GM053567 · NIGMS · UNIVERSITY OF CONNECTICUT STORRS · PI TESCHKE, CAROLYN M · 2000 to 2003
$869k
Minority PreDoctoral Fellowship ProgramF31GM073598 · NIGMS · UNIVERSITY OF CONNECTICUT STORRS · PI PARENT, KRISTIN N · 2005 to 2006
$62k
FOLDING OF PHAGE P22 STRUCTURAL PROTEINSR29GM053567 · NIGMS · UNIVERSITY OF CONNECTICUT STORRS · PI TESCHKE, CAROLYN M · 1995 to 1999
–
NIGMS NIH HHS F31 GM073598NIGMS NIH HHS GM073598NIGMS NIH HHS GM53567NIGMS NIH HHS R01 GM053567NIGMS NIH HHS R29 GM053567
6 · The paper itself

Abstract

Phage P22 wild-type (WT) coat protein does not require GroEL/S to fold but temperature-sensitive-folding (tsf) coat proteins need the chaperone complex for correct folding. WT coat protein and all variants absolutely require P22 scaffolding protein, an assembly chaperone, to assemble into precursor structures termed procapsids. Previously, we showed that a global suppressor (su) substitution, T1661, which rescues several tsf coat protein variants, functioned by inducing GroEL/S. This led to an increased formation of tsf:T1661 coat protein:GroEL complexes compared with the tsf parents. The increased concentration of complexes resulted in more assembly-competent coat proteins because of a shift in the chaperone-driven kinetic partitioning between aggregation-prone intermediates toward correct folding and assembly. We have now investigated the folding and assembly of coat protein variants that carry a different global su substitution, F170L. By monitoring levels of phage production in the presence of a dysfunctional GroEL we found that tsf:F170L proteins demonstrate a less stringent requirement for GroEL. Tsf:F170L proteins also did not cause induction of the chaperones. Circular dichroism and tryptophan fluorescence indicate that the native state of the tsf: F170L coat proteins is restored to WT-like values. In addition, native acrylamide gel electrophoresis shows a stabilized native state for tsf:F170L coat proteins. The F170L su substitution also increases procapsid production compared with their tsf parents. We propose that the F170L su substitution has a decreased requirement for the chaperones GroEL and GroES as a result of restoring the tsf coat proteins to a WT-like state. Our data also suggest that GroEL/S can be induced by increasing the population of unfolding intermediates.

Indexed as

Protein FoldingAmino Acid SubstitutionBacteriophage P22Capsid ProteinsChaperonin 10Chaperonin 60Escherichia coliLeucineModels, BiologicalMutant ProteinsPhenylalanineProtein Structure, SecondarySubstrate SpecificitySuppression, GeneticTemperatureThermodynamicsCapsid ProteinsChaperonin 10Chaperonin 60LeucineMutant ProteinsPhenylalanine

Identifiers

PMID17441504
PMCPMC1852890
OpenAlexW2020140198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.