Evidence map›Paper›PMID 17440433›Full record

ArticleMolecular psychiatry2007

TGFB-induced factor (TGIF): a candidate gene for psychosis on chromosome 18p.

I Chavarría-Siles, C Walss-Bass, P Quezada, A Dassori, S Contreras, R Medina, M Ramírez, R Armas, R Salazar, R J Leach and 2 more

Abstract read
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In one paragraph

Article in Molecular psychiatry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Convergent genomic and pharmacological evidence of PI3K/GSK3 signaling alterations in neurons from schizophrenia patients.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2021
    Article
  6. Review
  7. Article
  8. Article
  9. Association between polymorphisms in the metallophosphoesterase (MPPE1) gene and bipolar disorder.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2010
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

I Chavarría-SilesPsychiatric Genetics Research Center, Department of Psychiatry, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA.
C Walss-Bass
P Quezada
A Dassori
S Contreras
R Medina
M Ramírez
R Armas
R Salazar
R J Leach
H Raventos
M A Escamilla
The University of Texas Health Science Center at San Antonio · USUniversidad de Costa Rica · CRLangley Porter Psychiatric Hospital and Clinics · US

Funding

POPULATION BASED MAPPING OF SCHIZOPHRENIA GENESR01MH061884 · NIMH · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI ESCAMILLA, MICHAEL A · 2000 to 2011
$6.0M
US/Costa Rica Psychiatric Genetic Research TrainingD43TW006152 · FIC · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI ESCAMILLA, MICHAEL A · 2002 to 2006
$2.0M
FIC NIH HHS D43 TW06152NIMH NIH HHS R01-MH61884
6 · The paper itself

Abstract

Schizophrenia (SC) and bipolar disorder (BP) share many clinical features, among them psychosis. We previously identified a putative gene locus for psychosis on chromosome 18p in a sample from the Central Valley of Costa Rica (CVCR) population. The present study replicated the association to a specific allele of microsatellite marker D18S63 on 18p11.3, using a newly collected sample from the CVCR. A combined analysis of both samples, plus additional subjects, showed that this specific allele on D18S63, which lies within an intron on the TGFB-induced factor (TGIF) gene, is strongly associated (P-value=0.0005) with psychosis. Eleven additional SNP markers, spanning five genes in the region, were analyzed in the combined sample from the CVCR. Only the four SNPs within the TGIF gene were in strong linkage disequilibrium with D18S63 (D'=1.00). A specific haplotype for all five markers within the TGIF gene showed evidence of association (P-value=0.011) to psychosis. A second, distinct haplotype, containing a newly identified nonsynonymous polymorphism in exon 5 of the TGIF gene, showed a nonsignificant trend towards association to psychosis (P-value=0.077). TGIF is involved in neurodevelopment, neuron survival and controls the expression of dopamine receptors. Altogether, our results point to the possible involvement of TGIF in the pathophysiology of psychotic disorders in the CVCR population.

Indexed as

Chromosomes, Human, Pair 18Genetic Predisposition to DiseasePolymorphism, Single-Stranded ConformationalAllelesAnimalsChromosome MappingCosta RicaDNA Mutational AnalysisFamily HealthFemaleGene FrequencyHomeodomain ProteinsHumansLinkage DisequilibriumMalePsychotic DisordersHomeodomain ProteinsRepressor ProteinsTGIF1 protein, human

Identifiers

PMID17440433
OpenAlexW2072846280

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.