Evidence map›Paper›PMID 17439962›Full record

ArticleNucleic acids research2007

Loop II of DNA polymerase beta is important for polymerization activity and fidelity.

George C Lin, Joachim Jaeger, Joann B Sweasy

Abstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

George C LinDepartment of Therapeutic Radiology, Yale University School of Medicine, New Haven, Connecticut 06520, USA.
Joachim Jaeger
Joann B Sweasy

Funding

DNA POLYMERASE BETA AND MUTAGENESISR01CA080830 · NCI · YALE UNIVERSITY · PI SWEASY, JOANN B. · 1999 to 2018
$6.1M
NCI NIH HHS CA80830NCI NIH HHS R01 CA080830
6 · The paper itself

Abstract

The accurate replication and transmission of genetic information is critical in the life of an organism. During its entire lifespan, the genetic information is constantly under attack from endogenous and exogenous sources of damage. To ensure that the content of its genetic information is faithfully preserved for synthesis and transmission, eukaryotic cells have developed a complex system of genomic quality control. Key players in this process are DNA polymerases, the enzymes responsible for synthesizing the DNA, because errors introduced into the genome by polymerase can result in mutations. We use DNA polymerase beta (pol beta) as a model system to investigate mechanisms of preserving fidelity during nucleotide incorporation. In the study described here, we characterized the role that loop II of pol beta plays in maintaining the activity and fidelity of pol beta. We report here that the absence or shortening of loop II compromises the catalytic activity of pol beta. Our data also show that loop variants of a specific length have a lower fidelity when compared to the wild-type polymerase. Taken together, our results indicate that loop II is important for the catalytic activity and fidelity of pol beta.

Indexed as

AnimalsCatalysisDNADNA Polymerase betaDNA RepairKineticsMiceModels, MolecularMutationPhenotypeDNADNA Polymerase beta

Identifiers

PMID17439962
PMCPMC1888816

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.