Evidence map›Paper›PMID 17437146›Full record

ArticleThe Journal of membrane biology2007

Extracellular interaction between hCD98 and the PDZ class II domain of hCASK in intestinal epithelia.

Yutao Yan, Sona Vasudevan, Hang Nguyen, Ulrich Bork, Shanthi Sitaraman, Didier Merlin

Abstract read
PubMed Publisher
In one paragraph

Article in The Journal of membrane biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. iScience · 2022
    Article
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yutao YanDivision of Digestive Diseases, Department of Medicine, Emory University School of Medicine, 615 Michael Street, Atlanta, GA 30322, USA.
Sona Vasudevan
Hang Nguyen
Ulrich Bork
Shanthi Sitaraman
Didier Merlin
Emory University · USGeorgetown University · US

Funding

ROLE OF CD98 IN INTESTINAL PERMEABILITYR01DK071594 · NIDDK · GEORGIA STATE UNIVERSITY · PI MERLIN, DIDIER · 2006 to 2017
$3.3M
Neutrophil-Epithelial Interaction Mediated by AdenosineR01DK064711 · NIDDK · GEORGIA STATE UNIVERSITY · PI MERLIN, DIDIER · 2004 to 2013
$3.1M
hPepT1 in Intestinal InflammationR01DK061941 · NIDDK · EMORY UNIVERSITY · PI MERLIN, DIDIER · 2003 to 2008
$1.3M
hPepT1 in Intestinal InflammationR56DK061941 · NIDDK · EMORY UNIVERSITY · PI MERLIN, DIDIER · 2009 to 2009
$436k
NIDDK NIH HHS DK061941NIDDK NIH HHS DK064711-01NIDDK NIH HHS DK071594
6 · The paper itself

Abstract

The extracellular domain of the glycoprotein-associated integrin hCD98 protrudes into the basolateral extracellular space of the intestine and contains a PDZ class II-binding domain (GLLLRFPYAA, amino acids 520-529). Protein-protein interaction studies in vitro as well as in human colonic sections and Caco2-BBE cells have revealed that hCD98 coimmunoprecipitated with the basolateral membrane-associated guanylate kinase hCASK and that this interaction occurred in a PDZ domain-dependent manner. These novel results, which provide the first evidence for a PDZ domain-dependent interaction between a membrane protein and an extracellular protein, open a new field of investigation related to extracellular signaling in cell biology.

Indexed as

Caco-2 CellsFusion Regulatory Protein-1Guanylate KinasesHumansIntestinal MucosaMembrane ProteinsProtein Structure, TertiaryCASK kinasesFusion Regulatory Protein-1Guanylate KinasesMembrane Proteins

Identifiers

PMID17437146
OpenAlexW2068557574

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.