Evidence map›Paper›PMID 17436244›Full record

ArticleAmerican journal of human genetics2007

Hypomorphic mutations in the gene encoding a key Fanconi anemia protein, FANCD2, sustain a significant group of FA-D2 patients with severe phenotype.

Reinhard Kalb, Kornelia Neveling, Holger Hoehn, Hildegard Schneider, Yvonne Linka, Sat Dev Batish, Curtis Hunt, Marianne Berwick, Elsa Callen, Jordi Surralles and 14 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 71 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 1 synthesis or guideline pooled it, 136 citations in OpenAlex.

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11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

24 authors at 9 institutions in 5 countries.

Reinhard KalbDepartment of Human Genetics, University of Wurzburg, Wurzburg, Germany.
Kornelia Neveling
Holger Hoehn
Hildegard Schneider
Yvonne Linka
Sat Dev Batish
Curtis Hunt
Marianne Berwick
Elsa Callen
Jordi Surralles
Jose A Casado
Juan Bueren
Angeles Dasi
Jean Soulier
Eliane Gluckman
C Michel Zwaan
Rosalina van Spaendonk
Gerard Pals
Johan P de Winter
Hans Joenje
Markus Grompe
Arleen D Auerbach
Helmut Hanenberg
Detlev Schindler
Heinrich Heine University Düsseldorf · DEUniversity of Würzburg · DEUniversitat Autònoma de Barcelona · ESRockefeller University · USUniversity of New Mexico · USHôpital Saint-Louis · FRHospital Universitari i Politècnic La Fe · ESOregon Health & Science University · USVrije Universiteit Amsterdam · NL

Funding

FANCONI ANEMIA--HETEROGENEITY AND CARRIER DETECTIONR37HL032987 · NHLBI · ROCKEFELLER UNIVERSITY · PI AUERBACH, ARLEEN D · 1997 to 2007
$3.2M
The Risk of Cancer in Fanconi Anemia HeterozygotesR01CA082678 · NCI · UNIVERSITY OF NEW MEXICO · PI BERWICK, MARIANNE · 2001 to 2005
$1.2M
NCI NIH HHS R01 CA082678NCI NIH HHS R01 CA82678NHLBI NIH HHS R37 HL032987NHLBI NIH HHS R37 HL32987
6 · The paper itself

Abstract

FANCD2 is an evolutionarily conserved Fanconi anemia (FA) gene that plays a key role in DNA double-strand-type damage responses. Using complementation assays and immunoblotting, a consortium of American and European groups assigned 29 patients with FA from 23 families and 4 additional unrelated patients to complementation group FA-D2. This amounts to 3%-6% of FA-affected patients registered in various data sets. Malformations are frequent in FA-D2 patients, and hematological manifestations appear earlier and progress more rapidly when compared with all other patients combined (FA-non-D2) in the International Fanconi Anemia Registry. FANCD2 is flanked by two pseudogenes. Mutation analysis revealed the expected total of 66 mutated alleles, 34 of which result in aberrant splicing patterns. Many mutations are recurrent and have ethnic associations and shared allelic haplotypes. There were no biallelic null mutations; residual FANCD2 protein of both isotypes was observed in all available patient cell lines. These analyses suggest that, unlike the knockout mouse model, total absence of FANCD2 does not exist in FA-D2 patients, because of constraints on viable combinations of FANCD2 mutations. Although hypomorphic mutations arie involved, clinically, these patients have a relatively severe form of FA.

Indexed as

MutationAllelesBase SequenceCell LineChildChild, PreschoolDNA PrimersEthnicityExonsFanconi AnemiaFanconi Anemia Complementation Group D2 ProteinFemaleGenetic Complementation TestHumansIntronsMaleDNA PrimersFanconi Anemia Complementation Group D2 ProteinRNA Precursors

Identifiers

PMID17436244
PMCPMC1852747
OpenAlexW2110911775

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.