Evidence map›Paper›PMID 17432935›Full record

ArticlePLoS genetics2007

Multiple-pathway analysis of double-strand break repair mutations in Drosophila.

Dena M Johnson-Schlitz, Carlos Flores, William R Engels

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 51 citations in OpenAlex.

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  11. Drosophila IRBP bZIP heterodimer binds P-element DNA and affects hybrid dysgenesis.Proceedings of the National Academy of Sciences of the United States of America · 2016
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  20. Unphosphorylated STAT and heterochromatin protect genome stability.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Dena M Johnson-SchlitzDepartment of Genetics, University of Wisconsin, Madison, Wisconsin, United States of America.
Carlos Flores
William R Engels
University of Wisconsin–Madison · US

Funding

TRANSPOSITION AND DNA REPAIR IN DROSOPHILAR01GM030948 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI ENGELS, WILLIAM R. · 1985 to 2011
$5.2M
NIGMS NIH HHS R01 GM030948NIGMS NIH HHS R01-GM30948
6 · The paper itself

Abstract

The analysis of double-strand break (DSB) repair is complicated by the existence of several pathways utilizing a large number of genes. Moreover, many of these genes have been shown to have multiple roles in DSB repair. To address this complexity we used a repair reporter construct designed to measure multiple repair outcomes simultaneously. This approach provides estimates of the relative usage of several DSB repair pathways in the premeiotic male germline of Drosophila. We applied this system to mutations at each of 11 repair loci plus various double mutants and altered dosage genotypes. Most of the mutants were found to suppress one of the pathways with a compensating increase in one or more of the others. Perhaps surprisingly, none of the single mutants suppressed more than one pathway, but they varied widely in how the suppression was compensated. We found several cases in which two or more loci were similar in which pathway was suppressed while differing in how this suppression was compensated. Taken as a whole, the data suggest that the choice of which repair pathway is used for a given DSB occurs by a two-stage "decision circuit" in which the DSB is first placed into one of two pools from which a specific pathway is then selected.

Indexed as

DNA Breaks, Double-StrandedMutationAnimalsDNA RepairDNA, Single-StrandedDrosophilaModels, BiologicalModels, GeneticPhenotypeRecombination, GeneticSignal TransductionSister Chromatid ExchangeDNA, Single-Stranded

Identifiers

PMID17432935
PMCPMC1851981
OpenAlexW2035674322

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.