Evidence map›Paper›PMID 17428847›Full record

ArticleJournal of virology2007

Cytidine deaminases APOBEC3G and APOBEC3F interact with human immunodeficiency virus type 1 integrase and inhibit proviral DNA formation.

Kun Luo, Tao Wang, Bindong Liu, Chunjuan Tian, Zuoxiang Xiao, John Kappes, Xiao-Fang Yu

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 150 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
150citing papers in PubMed, 1 pooled it
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

150 citing papers in PubMed, 1 synthesis or guideline pooled it, 218 citations in OpenAlex.

  1. HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.Microbiology and molecular biology reviews : MMBR · 2016
    Pooled it
  2. Review
  3. Review
  4. Structural insights into PPP2R5A degradation by HIV-1 Vif.Nature structural & molecular biology · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Barriers for HIV Cure: The Latent Reservoir.AIDS research and human retroviruses · 2018
    Review
  18. Deaminase-Dead Mouse APOBEC3 Is anJournal of virology · 2018
    Article
  19. Article
  20. Article

90 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Kun LuoDepartment of Microbiology and Immunology, Johns Hopkins Bloomberg School of Public Health, 615 N. Wolfe Street, Baltimore, MD 21205, USA.
Tao Wang
Bindong Liu
Chunjuan Tian
Zuoxiang Xiao
John Kappes
Xiao-Fang Yu
Johns Hopkins University · USSecond Affiliated Hospital of Zhejiang University · CNUniversity of Alabama at Birmingham · US

Funding

Role of Cul5 E3 ubiquitin ligase in HIV Vif functionR01AI062644 · NIAID · JOHNS HOPKINS UNIVERSITY · PI YU, XIAO-FANG · 2004 to 2008
$1.6M
Role of Cul5 E3 Ubiquitin ligasae in HIV Vif function: A novel regulatorR56AI062644 · NIAID · JOHNS HOPKINS UNIVERSITY · PI YU, XIAO-FANG · 2010 to 2010
$369k
NIAID NIH HHS AI062644NIAID NIH HHS R01 AI062644NIAID NIH HHS R56 AI062644
6 · The paper itself

Abstract

APOBEC3G (A3G) is a single-stranded DNA cytidine deaminase that targets retroviral minus-strand DNA and has potent antiviral activity against diverse retroviruses. However, the mechanisms of A3G antiviral functions are incompletely understood. Here we demonstrate that A3G, A3F, and, to a lesser extent, the noncatalytic A3GC291S block human immunodeficiency virus type 1 (HIV-1) replication by interfering with proviral DNA formation. In HIV-1 virions, A3G interacted with HIV-1 integrase and nucleocapsid, key viral factors for reverse transcription and integration. Unlike A3G, the weak antiviral A3C cytidine deaminase did not interact with either of these factors and did not affect viral reverse transcription or proviral DNA formation. Thus, multiple steps of the HIV-1 replication cycle, most noticeably the formation of proviral DNA, are inhibited by both cytidine deamination-dependent and -independent mechanisms.

Indexed as

APOBEC-3G DeaminaseCytidine DeaminaseCytosine DeaminaseDNA, ViralHeLa CellsHIV-1HIV IntegraseHumansNucleoside DeaminasesRepressor ProteinsReverse TranscriptionVirus IntegrationVirus ReplicationAPOBEC3F protein, humanAPOBEC-3G DeaminaseAPOBEC3G protein, humanCytidine DeaminaseCytosine DeaminaseDNA, ViralHIV IntegraseNucleoside DeaminasesRepressor Proteins

Identifiers

PMID17428847
PMCPMC1933265
OpenAlexW2110013539

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.