Evidence map›Paper›PMID 17417609›Full record

ArticleMolecular vision2007

Investigation of founder effects for the Thr377Met Myocilin mutation in glaucoma families from differing ethnic backgrounds.

Alex W Hewitt, John R Samples, R Rand Allingham, Irma Järvelä, George Kitsos, Subbaiah R Krishnadas, Julia E Richards, Paul R Lichter, Michael B Petersen, Periasamy Sundaresan and 3 more

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Alex W HewittDepartment of Ophthalmology, Flinders University, Adelaide, Australia.
John R Samples
R Rand Allingham
Irma Järvelä
George Kitsos
Subbaiah R Krishnadas
Julia E Richards
Paul R Lichter
Michael B Petersen
Periasamy Sundaresan
Janey L Wiggs
David A Mackey
Mary K Wirtz
Flinders University · AU

Funding

Proteomics CoreP30EY010572 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI TED S ACOTT · 1995 to 2026
$19.4M
GENETICS OF ADULT-ONSET PRIMARY OPEN-ANGLE GLAUCOMAR01EY011650 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI WIRTZ, MARY K · 1997 to 2014
$5.0M
FAMILIAL PRIMARY OPEN ANGLE GLAUCOMAR01EY010886 · NEI · TUFTS MEDICAL CENTER · PI WIGGS, JANEY L · 1995 to 2004
$4.7M
Genomic Convergence in Primary Open Angle GlaucomaR01EY015543 · NEI · DUKE UNIVERSITY · PI ALLINGHAM, ROBERT RAND · 2005 to 2009
$3.4M
NEI NIH HHS 5P30EY010572NEI NIH HHS EY010886NEI NIH HHS EY015543NEI NIH HHS EY11650NEI NIH HHS P30 EY010572NEI NIH HHS R01 EY010886NEI NIH HHS R01 EY011650NEI NIH HHS R01 EY015543
6 · The paper itself

Abstract

purposeThe aim of this study was to determine if there is a common founder for the Thr377Met myocilin mutation in primary open angle glaucoma (POAG) families with various ethnic backgrounds.

methodsGenomic DNA of 24 POAG-affected individuals from nine pedigrees with the Thr377Met mutation and 104 unaffected family members was genotyped with six microsatellite markers and four single nucleotide polymorphisms. The families were from Greece, India, Finland, the USA, and Australia. To assess the degree of linkage disequilibrium across MYOC in the general population we also investigated data generated from the HapMap consortium.

resultsThree distinct haplotypes associated with the Thr377Met myocilin mutation were identified. The families from the USA and Greece, as well as the three Australian families originating from Greece and the former Yugoslavian Republic of Macedonia had one common haplotype. Interestingly, however, HapMap data suggest that linkage disequilibrium across MYOC was not strong.

conclusionsThe Thr377Met myocilin mutation has arisen at least three separate times. Evidence for genetic founder effects in this prevalent age-related, yet heterogeneous, disease has important implications for future gene identification strategies.

Indexed as

Founder EffectMutationAdultAustraliaCytoskeletal ProteinsEuropeEye ProteinsGlaucoma, Open-AngleGlycoproteinsHaplotypesHumansLinkage DisequilibriumMethionineMicrosatellite RepeatsMiddle AgedMyocilinCytoskeletal ProteinsEye ProteinsGlycoproteinsMethionineMyocilinThreonine

Identifiers

PMID17417609
PMCPMC2649311
OpenAlexW2125854309

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.