Evidence map›Paper›PMID 17416893›Full record

ArticleEukaryotic cell2007

Further characterization of the signaling proteolysis step in the Aspergillus nidulans pH signal transduction pathway.

María M Peñas, América Hervás-Aguilar, Tatiana Múnera-Huertas, Elena Reoyo, Miguel A Peñalva, Herbert N Arst, Joan Tilburn

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 66 citations in OpenAlex.

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  12. PApplied and environmental microbiology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

María M PeñasDepartment of Molecular Microbiology and Infection, Imperial College London, Flowers Building, Armstrong Road, London, United Kingdom.
América Hervás-Aguilar
Tatiana Múnera-Huertas
Elena Reoyo
Miguel A Peñalva
Herbert N Arst
Joan Tilburn
Imperial College London · GBCentro de Investigaciones Biológicas Margarita Salas · ES

Funding

Wellcome TrustWellcome Trust 067878
6 · The paper itself

Abstract

The Aspergillus nidulans pH-responsive transcription factor PacC is modulated by limited, two-step proteolysis. The first, pH-regulated cleavage occurs in the 24-residue highly conserved "signaling protease box" in response to the alkaline pH signal. This is transduced by the Pal signaling pathway, containing the predicted calpain-like cysteine protease and likely signaling protease, PalB. In this work, we carried out classical mutational analysis of the putative signaling protease PalB, and we describe 9 missense and 18 truncating loss-of-function (including null) mutations. Mutations in the region of and affecting directly the predicted catalytic cysteine strongly support the deduction that PalB is a cysteine protease. Truncating and missense mutations affecting the C terminus highlight the importance of this region. Analysis of three-hemagglutinin-tagged PalB in Western blots demonstrates that PalB levels are independent of pH and Pal signal transduction. We have followed the processing of MYC(3)-tagged PacC in Western blots. We show unequivocally that PalB is essential for signaling proteolysis and is definitely not the processing protease. In addition, we have replaced 15 residues of the signaling protease box of MYC(3)-tagged PacC (pacC900) with alanine. The majority of these substitutions are silent. Leu481Ala, Tyr493Ala, and Gln499Ala result in delayed PacC processing in response to shifting from acidic to alkaline medium, as determined by Western blot analysis. Leu498Ala reduces function much more markedly, as determined by plate tests and processing recalcitrance. Excepting Leu498, this demonstrates that PacC signaling proteolysis is largely independent of sequence in the cleavage region.

Indexed as

Hydrogen-Ion ConcentrationAmino Acid SequenceAspergillus nidulansCysteine EndopeptidasesDNA Mutational AnalysisFungal ProteinsGene Expression Regulation, FungalMolecular Sequence DataMutagenesisMutationPhenotypeSequence AlignmentSignal TransductionTranscription FactorsCysteine EndopeptidasesFungal ProteinsPacC protein, AspergillusPalB protein, Aspergillus nidulansTranscription Factors

Identifiers

PMID17416893
PMCPMC1951515
OpenAlexW2136140853

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.