Evidence map›Paper›PMID 17412959›Full record

ArticleScience (New York, N.Y.)2007

Regulation of a cyclin-CDK-CDK inhibitor complex by inositol pyrophosphates.

Young-Sam Lee, Sashidhar Mulugu, John D York, Erin K O'Shea

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 174 papers.

0numbers the graph read from it
0cells of the map it votes in
174citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

174 citing papers in PubMed, 310 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
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114 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Young-Sam LeeHoward Hughes Medical Institute, Faculty of Arts and Sciences Center for Systems Biology, Department of Molecular and Cellular Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA 02138, USA.
Sashidhar Mulugu
John D York
Erin K O'Shea
Howard Hughes Medical Institute · US

Funding

Oscilloscopes Spatio-Temporal Metabolomics (RMI)R33DK070272 · NIDDK · DUKE UNIVERSITY · PI YORK, JOHN D. · 2004 to 2006
$5.5M
The Role of Inositol Signaling in Human DiseaseR01HL055672 · NHLBI · WASHINGTON UNIVERSITY · PI YORK, JOHN D. · 1996 to 2012
$5.4M
REGULATION OF YEAST PHO5 GENER01GM051377 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI O'SHEA, ERIN K. · 1994 to 2011
$3.7M
NHLBI NIH HHS HL055672NIDDK NIH HHS DK070272NIGMS NIH HHS R01 GM051377
6 · The paper itself

Abstract

In budding yeast, phosphate starvation triggers inhibition of the Pho80-Pho85 cyclin-cyclin-dependent kinase (CDK) complex by the CDK inhibitor Pho81, leading to expression of genes involved in nutrient homeostasis. We isolated myo-d-inositol heptakisphosphate (IP7) as a cellular component that stimulates Pho81-dependent inhibition of Pho80-Pho85. IP7 is necessary for Pho81-dependent inhibition of Pho80-Pho85 in vitro. Moreover, intracellular concentrations of IP7 increased upon phosphate starvation, and yeast mutants defective in IP7 production failed to inhibit Pho80-Pho85 in response to phosphate starvation. These observations reveal regulation of a cyclin-CDK complex by a metabolite and suggest that a complex metabolic network mediates signaling of phosphate availability.

Indexed as

Cell NucleusCyclin-Dependent KinasesCyclinsDNA-Binding ProteinsInositol PhosphatesPhosphotransferases (Phosphate Group Acceptor)Recombinant ProteinsRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionTranscription FactorsCyclin-Dependent KinasesCyclinsDNA-Binding Proteinsinositol heptakisphosphateinositol hexakisphosphate kinaseInositol PhosphatesKCS1 protein, S cerevisiaePHO4 protein, S cerevisiaePHO80 protein, S cerevisiaePHO81 protein, S cerevisiaePHO85 protein, S cerevisiaePhosphotransferases (Phosphate Group Acceptor)Recombinant ProteinsRepressor ProteinsSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID17412959
PMCPMC2211727
OpenAlexW2044593393

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.