Evidence map›Paper›PMID 17408496›Full record

ArticleBMC genomics2007

Evaluation of toxicity of the mycotoxin citrinin using yeast ORF DNA microarray and Oligo DNA microarray.

Hitoshi Iwahashi, Emiko Kitagawa, Yoshiteru Suzuki, Youji Ueda, Yo-hei Ishizawa, Hitoshi Nobumasa, Yoshihide Kuboki, Hiroshi Hosoda, Yumiko Iwahashi

Open access · goldAbstract readComparative StudyEvaluation Study
In one paragraph

Article in BMC genomics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 69 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Hitoshi IwahashiHuman Stress Signal Research Center, National Institute of Industrial Science and Technology, AIST, Tsukuba West, Onogawa Tsukuba, Ibaraki, Japan. hitoshi.iwahashi@aist.go.jp
Emiko Kitagawa
Yoshiteru Suzuki
Youji Ueda
Yo-hei Ishizawa
Hitoshi Nobumasa
Yoshihide Kuboki
Hiroshi Hosoda
Yumiko Iwahashi
National Institute of Advanced Industrial Science and Technology · JPDNA Chip Research (Japan) · JPFood Research Institute · JPToray Industries, Inc. (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMycotoxins are fungal secondary metabolites commonly present in feed and food, and are widely regarded as hazardous contaminants. Citrinin, one of the very well known mycotoxins that was first isolated from Penicillium citrinum, is produced by more than 10 kinds of fungi, and is possibly spread all over the world. However, the information on the action mechanism of the toxin is limited. Thus, we investigated the citrinin-induced genomic response for evaluating its toxicity.

resultsCitrinin inhibited growth of yeast cells at a concentration higher than 100 ppm. We monitored the citrinin-induced mRNA expression profiles in yeast using the ORF DNA microarray and Oligo DNA microarray, and the expression profiles were compared with those of the other stress-inducing agents. Results obtained from both microarray experiments clustered together, but were different from those of the mycotoxin patulin. The oxidative stress response genes--AADs, FLR1, OYE3, GRE2, and MET17--were significantly induced. In the functional category, expression of genes involved in "metabolism", "cell rescue, defense and virulence", and "energy" were significantly activated. In the category of "metabolism", genes involved in the glutathione synthesis pathway were activated, and in the category of "cell rescue, defense and virulence", the ABC transporter genes were induced. To alleviate the induced stress, these cells might pump out the citrinin after modification with glutathione. While, the citrinin treatment did not induce the genes involved in the DNA repair.

conclusionResults from both microarray studies suggest that citrinin treatment induced oxidative stress in yeast cells. The genotoxicity was less severe than the patulin, suggesting that citrinin is less toxic than patulin. The reproducibility of the expression profiles was much better with the Oligo DNA microarray. However, the Oligo DNA microarray did not completely overcome cross hybridization.

Indexed as

OligonucleotidesOpen Reading FramesCitrininCluster AnalysisGene Expression Regulation, FungalGenes, FungalGlutathioneMetabolic Networks and PathwaysMethionineModels, BiologicalOligonucleotide Array Sequence AnalysisPatulinSaccharomyces cerevisiaeToxicity TestsCitrininGlutathioneMethionineOligonucleotidesPatulin

Identifiers

PMID17408496
PMCPMC1865386
OpenAlexW2012467608

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.