Evidence map›Paper›PMID 17407561›Full record

ArticleArthritis research & therapy2007

High abundance synovial fluid proteome: distinct profiles in health and osteoarthritis.

Reuben Gobezie, Alvin Kho, Bryan Krastins, David A Sarracino, Thomas S Thornhill, Michael Chase, Peter J Millett, David M Lee

Open access · goldAbstract read
In one paragraph

Article in Arthritis research & therapy, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 120 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
120citing papers in PubMed, 2 pooled it
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

120 citing papers in PubMed, 2 syntheses or guidelines pooled it, 245 citations in OpenAlex.

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60 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Reuben GobezieThe Case Center for Proteomics, Case Western Reserve University School of Medicine, Euclid Avenue, Cleveland, Ohio 44106, USA. reuben.gobezie@uhhs.com
Alvin Kho
Bryan Krastins
David A Sarracino
Thomas S Thornhill
Michael Chase
Peter J Millett
David M Lee
Case Western Reserve University · USUniversity School · USHarvard University · US

Funding

Progenitor Cells inHuman Skeletal MuscleP01NS040828 · NINDS · CHILDREN'S HOSPITAL BOSTON · PI KUNKEL, LOUIS M · 2001 to 2007
$8.6M
NINDS NIH HHS P01 NS040828
6 · The paper itself

Abstract

The development of increasingly high-throughput and sensitive mass spectroscopy-based proteomic techniques provides new opportunities to examine the physiology and pathophysiology of many biologic fluids and tissues. The purpose of this study was to determine protein expression profiles of high-abundance synovial fluid (SF) proteins in health and in the prevalent joint disease osteoarthritis (OA). A cross-sectional study of 62 patients with early OA (n = 21), patients with late OA (n = 21), and control individuals (n = 20) was conducted. SF proteins were separated by using one-dimensional PAGE, and the in-gel digested proteins were analyzed by electrospray ionization tandem mass spectrometry. A total of 362 spots were examined and 135 high-abundance SF proteins were identified as being expressed across all three study cohorts. A total of 135 SF proteins were identified. Eighteen proteins were found to be significantly differentially expressed between control individuals and OA patients. Two subsets of OA that are not dependent on disease duration were identified using unsupervised analysis of the data. Several novel SF proteins were also identified. Our analyses demonstrate no disease duration-dependent differences in abundant protein composition of SF in OA, and we clearly identified two previously unappreciated yet distinct subsets of protein profiles in this disease cohort. Additionally, our findings reveal novel abundant protein species in healthy SF whose functional contribution to SF physiology was not previously recognized. Finally, our studies identify candidate biomarkers for OA with potential for use as highly sensitive and specific tests for diagnostic purposes or for evaluating therapeutic response.

Indexed as

BiomarkersCross-Sectional StudiesElectrophoresis, Polyacrylamide GelGene ExpressionGene Expression ProfilingHumansKneeOsteoarthritisPrincipal Component AnalysisProteomeSpectrometry, Mass, Electrospray IonizationSynovial FluidBiomarkersProteome

Identifiers

PMID17407561
PMCPMC1906814
OpenAlexW2124248657

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.