ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2007
Integrated cytogenetic BAC map of the genome of the gray, short-tailed opossum, Monodelphis domestica.
Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
12 citing papers in PubMed, 30 citations in OpenAlex.
- Review
- Tracing the evolution of amniote chromosomes.Chromosoma · 2014Review
- An integrated genetic and cytogenetic map for Zhikong scallop, Chlamys farreri, based on microsatellite markers.PloS one · 2014Article
- Reconstruction of the ancestral marsupial karyotype from comparative gene maps.BMC evolutionary biology · 2013Article
- The sex-specific impact of meiotic recombination on nucleotide composition.Genome biology and evolution · 2012Article
- Review
- A first-generation integrated tammar wallaby map and its use in creating a tammar wallaby first-generation virtual genome map.BMC genomics · 2011Article
- PiRNA-like RNAs in the marsupial Monodelphis domestica identify transcription clusters and likely marsupial transposon targets.Mammalian genome : official journal of the International Mammalian Genome Society · 2008Article
- The opossum genome: insights and opportunities from an alternative mammal.Genome research · 2008Review
- Physical map of two tammar wallaby chromosomes: a strategy for mapping in non-model mammals.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2008Article
- The search for a marsupial XIC reveals a break with vertebrate synteny.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2007Article
- An X chromosome microRNA cluster in the marsupial species Monodelphis domestica.The Journal of heredityArticle
Corrections and comments
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Authors and funding
5 authors at 3 institutions in 1 country.
Funding
Abstract
The generation of high-quality genome assemblies for numerous species is advancing at a rapid pace. As the number of genome assemblies increases, so does our ability to investigate genome relationships and their contributions to unraveling complex biological, evolutionary, and biomedical processes. A key process in the generation of a genome assembly is to determine and verify the precise physical location and order of the large sequence blocks (scaffolds) that result from the assembly. For organisms of relatively recent common ancestry this process may be achieved largely through comparative sequence alignment. However, as the evolutionary distance between species lengthens, the use of comparative sequence alignment becomes increasingly less reliable. Simultaneous cytogenetic mapping, using multicolor fluorescence in-situ hybridization (FISH) analysis, offers an alternative means to define the cytogenetic location and relative order of DNA sequences, thereby anchoring the genome sequence to the karyotype. In this article we report the molecular cytogenetic locations of 415 bacterial artificial chromosome (BAC) clones that served to anchor sequence scaffolds of the gray, short-tailed opossum (Monodelphis domestica) to its karyotype, which enabled accurate integration of these regions into the genome assembly.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.