Evidence map›Paper›PMID 17397959›Full record

ArticleVirus research2008

SARS coronavirus replicase proteins in pathogenesis.

Rachel L Graham, Jennifer S Sparks, Lance D Eckerle, Amy C Sims, Mark R Denison

Open access · greenAbstract read
In one paragraph

Article in Virus research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 175 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
  6. Article
  7. Bats-associated beta-coronavirus detection and characterization: First report from Pakistan.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2023
    Article
  8. Article
  9. Review
  10. virDTL: Viral Recombination Analysis Through Phylogenetic Reconciliation and Its Application to Sarbecoviruses and SARS-CoV-2.Journal of computational biology : a journal of computational molecular cell biology · 2023
    Article
  11. Ligand-based design, synthesis, computational insights, andJournal of enzyme inhibition and medicinal chemistry · 2022
    Article
  12. Article
  13. Article
  14. Article
  15. RNA enigma: "From origin of life to novel Coronavirus-COVID-19".Saudi journal of biological sciences · 2022
    Review
  16. Article
  17. Article
  18. Immunoinformatics approach of epitope prediction for SARS-CoV-2.Journal, genetic engineering & biotechnology · 2022
    Article
  19. Review
  20. Article

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Rachel L GrahamDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN, United States.
Jennifer S Sparks
Lance D Eckerle
Amy C Sims
Mark R Denison
Vanderbilt University Medical Center · USUniversity of North Carolina at Chapel Hill · US

Funding

SARS Replicase Proteins in Pathogenesis and ReplicationP01AI059443 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BARIC, RALPH S · 2005 to 2009
$9.2M
POLYMERASE PROTEINS IN CORONAVIRUS REPLICATIONR01AI026603 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DENISON, MARK R · 1994 to 2014
$4.1M
The Cell Biology of Coronavirus InfectionR01AI050083 · NIAID · VANDERBILT UNIVERSITY · PI DENISON, MARK R · 2003 to 2014
$3.5M
NIAID NIH HHS AI50083NIAID NIH HHS P01 AI059443NIAID NIH HHS P01AI059443-01NIAID NIH HHS R01 AI026603NIAID NIH HHS R01 AI050083NIAID NIH HHS R01 AI26603
6 · The paper itself

Abstract

Much progress has been made in understanding the role of structural and accessory proteins in the pathogenesis of severe acute respiratory syndrome coronavirus (SARS-CoV) infections. The SARS epidemic also brought new attention to the proteins translated from ORF1a and ORF1b of the input genome RNA, also known as the replicase/transcriptase gene. Evidence for change within the ORF1ab coding sequence during the SARS epidemic, as well as evidence from studies with other coronaviruses, indicates that it is likely that the ORF1ab proteins play roles in virus pathogenesis distinct from or in addition to functions directly involved in viral replication. Recent reverse genetic studies have confirmed that proteins of ORF1ab may be involved in cellular signaling and modification of cellular gene expression, as well as virulence by mechanisms yet to be determined. Thus, the evolution of the ORF1ab proteins may be determined as much by issues of host range and virulence as they are by specific requirements for intracellular replication.

Indexed as

AnimalsChlorocebus aethiopsHumansOpen Reading FramesRNA-Dependent RNA PolymeraseSevere Acute Respiratory SyndromeSevere acute respiratory syndrome-related coronavirusVero CellsViral Nonstructural ProteinsVirulenceRNA-Dependent RNA PolymeraseViral Nonstructural Proteins

Identifiers

PMID17397959
PMCPMC2637536
OpenAlexW2034313472

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.