Evidence map›Paper›PMID 17391668›Full record

ArticleExperimental cell research2007

Transforming growth factor-beta1 regulates fibronectin isoform expression and splicing factor SRp40 expression during ATDC5 chondrogenic maturation.

Fei Han, James R Gilbert, Gerald Harrison, Christopher S Adams, Theresa Freeman, Zhuliang Tao, Raihana Zaka, Hongyan Liang, Charlene Williams, Rocky S Tuan and 2 more

Open access · greenAbstract read
In one paragraph

Article in Experimental cell research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Introductory review: periostin-gene and protein structure.Cellular and molecular life sciences : CMLS · 2017
    Review
  5. Article
  6. Tissue stiffness regulates serine/arginine-rich protein-mediated splicing of the extra domain B-fibronectin isoform in tumors.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Controlled differentiation of stem cells.Advanced drug delivery reviews · 2008
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Fei HanDepartment of Orthopaedic Surgery, Thomas Jefferson University, Philadelphia, PA 19107, USA.
James R Gilbert
Gerald Harrison
Christopher S Adams
Theresa Freeman
Zhuliang Tao
Raihana Zaka
Hongyan Liang
Charlene Williams
Rocky S Tuan
Pamela A Norton
Noreen J Hickok
Thomas Jefferson University · USNational Institute of Arthritis and Musculoskeletal and Skin Diseases · US

Funding

MOLECULAR CHARACTERIZATION OF FAMILIAL CHONDROCALCINOSISP01AR039740 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI JIMENEZ, SERGIO A · 1989 to 2006
$6.2M
Cell and Molecular Biology of Skeletal DevelopmentZ01AR041131 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI TUAN, ROCKY S · 2002 to 2008
$6.0M
BONE GROWTH IN DENTAL, CRANIAL AND SKELETAL TISSUESR01DE010875 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI SHAPIRO, IRVING M · 1994 to 2006
$2.4M
MOLECULAR CHARACTERIZATION OF FAMILIAL CHONDROCALCINOSISR01AR044360 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI WILLIAMS, CHARLENE J · 1996 to 2004
$1.1M
CRANIOFACIAL DEVELOPMENT: METABOLIC CONTROL OF APOPTOSISR01DE013319 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI SHAPIRO, IRVING M · 1999 to 2003
$1.1M
EXON-SPECIFIC FIBRONECTIN ISOFORMS AND CHONDROGENESISR01AR045181 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI HICKOK, NOREEN J · 2000 to 2003
$1.1M
MODULATION OF ALTERNATIVE SPLICING DURING CHONDROGENESISR01AR046821 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI NORTON, PAMELA A · 2000 to 2002
$785k
REGULATION OF APOPTOSIS IN OSTEOBLAST-LIKE CELLSF32DE005748 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI ADAMS, CHRISTOPHER S · 2001 to 2003
$148k
NIAMS NIH HHS AR39740NIAMS NIH HHS AR44360NIAMS NIH HHS AR45181NIAMS NIH HHS AR46821NIAMS NIH HHS P01 AR039740NIAMS NIH HHS R01 AR044360NIAMS NIH HHS R01 AR045181NIAMS NIH HHS R01 AR046821NIDCR NIH HHS DE-05748NIDCR NIH HHS DE-10875NIDCR NIH HHS DE-13310NIDCR NIH HHS F32 DE005748NIDCR NIH HHS R01 DE010875NIDCR NIH HHS R01 DE013319
6 · The paper itself

Abstract

Fibronectin (FN) isoform expression is altered during chondrocyte commitment and maturation, with cartilage favoring expression of FN isoforms that includes the type II repeat extra domain B (EDB) but excludes extra domain A (EDA). We and others have hypothesized that the regulated splicing of FN mRNAs is necessary for the progression of chondrogenesis. To test this, we treated the pre-chondrogenic cell line ATDC5 with transforming growth factor-beta1, which has been shown to modulate expression of the EDA and EDB exons, as well as the late markers of chondrocyte maturation; it also slightly accelerates the early acquisition of a sulfated proteoglycan matrix without affecting cell proliferation. When chondrocytes are treated with TGF-beta1, the EDA exon is preferentially excluded at all times whereas the EDB exon is relatively depleted at early times. This regulated alternative splicing of FN correlates with the regulation of alternative splicing of SRp40, a splicing factor facilitating inclusion of the EDA exon. To determine if overexpression of the SRp40 isoforms altered FN and FN EDA organization, cDNAs encoding these isoforms were overexpressed in ATDC5 cells. Overexpression of the long-form of SRp40 yielded an FN organization similar to TGF-beta1 treatment; whereas overexpression of the short form of SRp40 (which facilitates EDA inclusion) increased formation of long-thick FN fibrils. Therefore, we conclude that the effects of TGF-beta1 on FN splicing during chondrogenesis may be largely dependent on its effect on SRp40 isoform expression.

Indexed as

Alternative SplicingAnimalsCell LineCell ProliferationChondrocytesFibronectinsMiceMicroscopy, Electron, ScanningNuclear ProteinsProtein IsoformsProtein Structure, TertiaryRNA-Binding ProteinsSerine-Arginine Splicing FactorsTransforming Growth Factor beta1FibronectinsNuclear ProteinsProtein IsoformsRNA-Binding ProteinsSerine-Arginine Splicing FactorsTransforming Growth Factor beta1

Identifiers

PMID17391668
PMCPMC1920702
OpenAlexW1974694429

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.