Evidence map›Paper›PMID 17383425›Full record

ArticleGastroenterology2007

Pattern of transcription factor activation in Helicobacter pylori-infected Mongolian gerbils.

Takahiko Kudo, Hong Lu, Jeng-Yih Wu, Tomoyuki Ohno, Michael J Wu, Robert M Genta, David Y Graham, Yoshio Yamaoka

Open access · bronzeAbstract read
In one paragraph

Article in Gastroenterology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 38 citations in OpenAlex.

  1. Frontiers in immunology · 2024
    Review
  2. Binding of YY1/CREB to an Enhancer Region Triggers Claudin 6 Expression inInternational journal of molecular sciences · 2023
    Article
  3. Animal Models andJournal of clinical medicine · 2022
    Review
  4. Article
  5. Interleukin-1B signalling leads to increased survival of gastric carcinoma cells through a CREB-C/EBPβ-associated mechanism.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2016
    Article
  6. Review
  7. Review
  8. Helicobacter pylori virulence and cancer pathogenesis.Future oncology (London, England) · 2014
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Mechanisms of disease: Helicobacter pylori virulence factors.Nature reviews. Gastroenterology & hepatology · 2010
    Review
  17. Article
  18. Article
  19. Clinical relevance of cagPAI intactness in Helicobacter pylori isolates from Vietnam.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2010
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Takahiko KudoDepartment of Medicine, Veterans Affairs Medical Center and Baylor College of Medicine, Houston, Texas 77030, USA.
Hong Lu
Jeng-Yih Wu
Tomoyuki Ohno
Michael J Wu
Robert M Genta
David Y Graham
Yoshio Yamaoka
Baylor College of Medicine · USKaohsiung Medical University Chung-Ho Memorial Hospital · TWShanghai Jiao Tong University · CNVA North Texas Health Care System · US

Funding

Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI FASIHA KANWAL · 2001 to 2026
$28.3M
REGULATION OF CXC CHEMOKINE EXPRESSION BY H. PYLORIR01DK062813 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI YAMAOKA, YOSHIO · 2004 to 2013
$3.0M
NIDDK NIH HHS DK56338NIDDK NIH HHS DK62813NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R01 DK062813
6 · The paper itself

Abstract

BACKGROUND AND

aimsHelicobacter pylori interact with epithelial cells resulting in activation of cellular signaling pathways leading to an inflammatory response. The pattern and timing of transcription factor activation in H pylori-infected gastric mucosa remain unclear. We investigated the roles of transcription factors in the gastric mucosa of H pylori-infected gerbils over the course of the infection.

methodsSix-week-old male Mongolian gerbils were inoculated orally with H pylori TN2GF4 or isogenic cagE mutants and examined at 1, 3, 9, and 18 months. We examined the expression of 54 transcription factors using DNA/protein arrays and electrophoretic mobility shift assays. Phosphorylation status of mitogen-activated protein kinases and IkappaB were evaluated by immunoblot and immunohistochemistry.

resultsTen transcription factors were up-regulated by H pylori infection. Six of these factors, including activator protein-1 (AP-1) and cAMP responsive element binding protein (CREB), reached maximal levels at 3 months and were strongly correlated with cellular inflammation and ulceration. Phosphorylation of extracellular signal-regulated kinase correlated with activation of AP-1 and CREB. Levels of nuclear factor-kappaB and interferon-stimulated responsive element (ISRE) peaked at 18 months and correlated with the presence of severe atrophy and with phosphorylation of Jun-N-terminal kinase (JNK), p38, and IkappaB.

conclusionsThe gastric mucosal transcription factors induced by H pylori infection differed according to the phase and outcome of infection; AP-1 and CREB levels were early responders related to inflammation and ulceration, whereas NF-kappaB and ISRE were late responders related to atrophy.

Indexed as

Helicobacter pyloriTranscriptional ActivationAnimalsCells, CulturedCyclic AMP Response Element-Binding ProteinCytokinesDisease Models, AnimalE2F Transcription FactorsEpithelial CellsGastric MucosaGene Expression ProfilingGerbillinaeHelicobacter InfectionsI-kappa B ProteinsInterferon Regulatory FactorsMaleCyclic AMP Response Element-Binding ProteinCytokinesE2F Transcription FactorsI-kappa B ProteinsInterferon Regulatory FactorsMitogen-Activated Protein KinasesNF-kappa BRNA, MessengerTranscription Factor AP-1Transcription FactorsUpstream Stimulatory Factors

Identifiers

PMID17383425
PMCPMC3131413
OpenAlexW2052582680

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.