Evidence map›Paper›PMID 17380195›Full record

ArticleMolecular medicine (Cambridge, Mass.)

Similarities and differences between the light and heavy chain Ig variable region gene repertoires in chronic lymphocytic leukemia.

Fabio Ghiotto, Franco Fais, Emilia Albesiano, Cristina Sison, Angelo Valetto, Gianluca Gaidano, Janine Reinhardt, Jonathan E Kolitz, Kanti Rai, Steven L Allen and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecular medicine (Cambridge, Mass.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Non-Hodgkin Lymphomas: Malignancies Arising from Mature B Cells.Cold Spring Harbor perspectives in medicine · 2021
    Review
  4. Chronic Lymphocytic Leukemia.Cold Spring Harbor perspectives in medicine · 2021
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Fabio GhiottoDepartment of Medicine, North Shore University Hospital, Manhasset, NY, USA. fghiotto@unige.it
Franco Fais
Emilia Albesiano
Cristina Sison
Angelo Valetto
Gianluca Gaidano
Janine Reinhardt
Jonathan E Kolitz
Kanti Rai
Steven L Allen
Manlio Ferrarini
Nicholas Chiorazzi
Feinstein Institute for Medical Research · USNorth Shore University Hospital · USNorthwell Health · USUniversità degli Studi del Piemonte Orientale “Amedeo Avogadro” · ITUniversity of Genoa · IT

Funding

WHITE MATTER STRUCTURAL DEFICITS IN HIGH FUNCTIONING CHILDREN WITH AUTISM SPEM01RR018535 · NCRR · FEINSTEIN INSTITUTE FOR MEDICAL RESEARCH · PI SCHWARTZ, GUY · 2003 to 2010
$19.5M
B CELL REPERTOIRES IN CHRONIC LYMPHOCYTIC LEUKEMIAR01CA081554 · NCI · NORTH SHORE UNIVERSITY HOSPITAL · PI CHIORAZZI, NICHOLAS · 2000 to 2012
$2.7M
B CLL SUBGROUPS--MATURATION STAGE AND GENE EXPRESSIONR01CA087956 · NCI · NORTH SHORE UNIVERSITY HOSPITAL · PI CHIORAZZI, NICHOLAS · 2001 to 2004
$1.2M
NCI NIH HHS R01 CA081554NCI NIH HHS R01 CA087956NCI NIH HHS R01 CA81554NCI NIH HHS R01 CA87956NCRR NIH HHS M01 RR018535
6 · The paper itself

Abstract

Analyses of Ig V(H)DJ(H) rearrangements expressed by B-CLL cells have provided insights into the antigen receptor repertoire of B-CLL cells and the maturation stages of B-lymphocytes that give rise to this disease. However, less information is available about the L chain V gene segments utilized by B-CLL cells and to what extent their characteristics resemble those of the H chain. We analyzed the V(L) and J(L) gene segments of 206 B-CLL patients, paying particular attention to frequency of use and association, mutation status, and LCDR3 characteristics. Approximately 40% of B-CLL cases express V(L) genes that differ significantly from their germline counterparts. Certain genes were virtually always mutated and others virtually never. In addition, preferential pairing of specific V(L) and J(L) segments was found. These findings are reminiscent of the expressed VH repertoire in B-CLL. However unlike the V(H) repertoire, V(L) gene use was not significantly different than that of normal B-lymphocytes. In addition, Vkappa genes that lie more upstream on the germline locus were less frequently mutated than those at the 3' end of the locus; this was not the case for Vlambda genes and is not for V(H) genes. These similarities and differences between the IgH and IgL V gene repertoires expressed in B-CLL suggest some novel features while also reinforcing concepts derived from studies of the IgH repertoire.

Indexed as

MutationAntigens, CDDNA, ComplementaryGene FrequencyGene RearrangementHumansImmunoglobulin Heavy ChainsImmunoglobulin Joining RegionImmunoglobulin Light ChainsImmunoglobulin MImmunoglobulin Variable RegionLeukemia, Lymphocytic, Chronic, B-CellMultigene FamilyReference ValuesRNA, NeoplasmAntigens, CDDNA, ComplementaryImmunoglobulin Heavy ChainsImmunoglobulin Joining RegionImmunoglobulin Light ChainsImmunoglobulin MImmunoglobulin Variable RegionRNA, Neoplasm

Identifiers

PMID17380195
PMCPMC1829199
OpenAlexW140434344

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.