Evidence map›Paper›PMID 17379346›Full record

ArticleVirus research2007

Rotavirus NSP4 interacts with both the amino- and carboxyl-termini of caveolin-1.

Kiran D Mir, Rebecca D Parr, Friedhelm Schroeder, Judith M Ball

Open access · greenAbstract read
In one paragraph

Article in Virus research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Caveolae as Potential Hijackable Gates in Cell Communication.Frontiers in cell and developmental biology · 2020
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Integrins alpha1beta1 and alpha2beta1 are receptors for the rotavirus enterotoxin.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kiran D MirDepartment of Pathobiology, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, TX 77843, USA.
Rebecca D Parr
Friedhelm Schroeder
Judith M Ball
Texas A&M University · US

Funding

Transport and Lipid Interactions of a Novel EnterotoxinR01GM062326 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI BALL, JUDITH MARCHAND · 2001 to 2005
$1.2M
NIGMS NIH HHS GM 3131651NIGMS NIH HHS GM 62326NIGMS NIH HHS R01 GM062326
6 · The paper itself

Abstract

Rotavirus NSP4 plays multiple roles in viral pathogenesis, morphogenesis and replication. We previously reported a direct interaction between full-length NSP4 and the enterotoxic peptide composed of NSP4 residues 114-135 with full-length caveolin-1, the structural protein of caveolae. Caveolin-1 forms a hairpin loop in the cytoplasmic leaflet of plasma membrane caveolae. This unique orientation results in both termini of caveolin-1 exposed to the cytoplasm. The goal of this study was to map the caveolin-1 residues that interact with NSP4 to obtain a more complete picture of this binding event. Utilizing reverse yeast two-hybrid analyses and direct peptide binding assays, the NSP4 binding site was localized to caveolin-1 residues 2-22 and 161-178, at the amino- and carboxyl-termini, respectively. However, NSP4 binding to one of the termini was sufficient for the interaction.

Indexed as

Amino Acid SequenceBase SequenceBinding SitesCaveolin 1DNA PrimersGlycoproteinsHumansIn Vitro TechniquesMolecular Sequence DataPeptide FragmentsProtein BindingProtein Structure, TertiaryRecombinant ProteinsRotavirusSequence DeletionToxins, BiologicalCAV1 protein, humanCaveolin 1DNA PrimersGlycoproteinsNS28 protein, rotavirusPeptide FragmentsRecombinant ProteinsToxins, BiologicalViral Nonstructural Proteins

Identifiers

PMID17379346
PMCPMC1978065
OpenAlexW2109960999

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.