Evidence map›Paper›PMID 17376868›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

RNA interference screen to identify genes required for Drosophila embryonic nervous system development.

Keita Koizumi, Haruhiro Higashida, Siuk Yoo, Mohamad Saharul Islam, Andrej I Ivanov, Vicky Guo, Paola Pozzi, Shu-Hua Yu, Alessandra C Rovescalli, Derek Tang and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
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  10. The Splicing FactorJournal of immunology (Baltimore, Md. : 1950) · 2018
    Article
  11. Article
  12. Article
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  14. Review
  15. Analysis of natural variation reveals neurogenetic networks for Drosophila olfactory behavior.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  16. Article
  17. Article
  18. Codes and circuits.Cellular and molecular neurobiology · 2011
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Keita KoizumiKanazawa University, 21st Century Centers of Excellence Program on Innovative Brain Science on Development, Learning, and Memory, Kanazawa 920-8640, Japan.
Haruhiro Higashida
Siuk Yoo
Mohamad Saharul Islam
Andrej I Ivanov
Vicky Guo
Paola Pozzi
Shu-Hua Yu
Alessandra C Rovescalli
Derek Tang
Marshall Nirenberg
National Heart Lung and Blood Institute · USNational Institutes of Health · USKanazawa University · JPAdvanced Science Research Center · JP

Funding

CELL RECOGNITION AND SYNAPSE FORMATIONZ01HL000009 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI NIRENBERG, MARSHALL WARREN · 1985 to 2008
$4.5M
Cell Recognition And Synapse FormationZIAHL000009 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI NIRENBERG, MARSHALL WARREN · 2009 to 2010
$4.4M
6 · The paper itself

Abstract

RNA interference (RNAi) has been shown to be a powerful method to study the function of genes in vivo by silencing endogenous mRNA with double-stranded (ds) RNA. Previously, we performed in vivo RNAi screening and identified 43 Drosophila genes, including 18 novel genes required for the development of the embryonic nervous system. In the present study, 22 additional genes affecting embryonic nervous system development were found. Novel RNAi-induced phenotypes affecting nervous system development were found for 16 of the 22 genes. Seven of the genes have unknown functions. Other genes found encode transcription factors, a chromatin-remodeling protein, membrane receptors, signaling molecules, and proteins involved in cell adhesion, RNA binding, and ion transport. Human orthologs were identified for proteins encoded by 16 of the genes. The total number of dsRNAs that we have tested for an RNAi-induced phenotype affecting the embryonic nervous system, including our previous study, is 7,312, which corresponds to approximately 50% of the genes in the Drosophila genome.

Indexed as

Gene Expression Regulation, DevelopmentalRNA InterferenceAnimalsCell AdhesionDatabases, GeneticDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianGenes, InsectMutationNervous SystemNeuronsPhenotypeRNA, Double-StrandedDrosophila ProteinsRNA, Double-Stranded

Identifiers

PMID17376868
PMCPMC1838491
OpenAlexW2062921431

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.