Evidence map›Paper›PMID 17374714›Full record

ArticleGenes & development2007

Ubiquitylation of histone H2B controls RNA polymerase II transcription elongation independently of histone H3 methylation.

Jason C Tanny, Hediye Erdjument-Bromage, Paul Tempst, C David Allis

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 158 citations in OpenAlex.

  1. Identification and characterization ofmicroPublication biology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Histone H2B ubiquitylation: Connections to transcription and effects on chromatin structure.Biochimica et biophysica acta. Gene regulatory mechanisms · 2024
    Review
  7. Article
  8. Review
  9. Article
  10. UPS writes a new saga of SAGA.Biochimica et biophysica acta. Gene regulatory mechanisms · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Nutrient sensitive proteinLife science alliance · 2022
    Article
  18. Review
  19. Decoding histone ubiquitylation.Frontiers in cell and developmental biology · 2022
    Review
  20. Article

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jason C TannyLaboratory of Chromatin Biology, The Rockefeller University, New York, New York 10021, USA.
Hediye Erdjument-Bromage
Paul Tempst
C David Allis
Memorial Sloan Kettering Cancer Center · USRockefeller University · US

Funding

INFLUENCE OF HISTONE H1 AND HMGS ON GENE EXPRESSIONR01GM040922 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ALLIS, CHARLES DAVID · 1989 to 2022
$10.0M
ENZYMOLOGY &BIOLOGICAL FUNC OF HISTONE ACETYLATIONR37GM053512 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ALLIS, CHARLES DAVID · 1999 to 2008
$4.2M
Chromatin Remodeling and Programmed DNA EliminationR01GM063959 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ALLIS, CHARLES DAVID · 2001 to 2008
$3.1M
NUCLEAR DETERMINATION AND DIFFERENTIATION IN DEVELOPMENTR01GM053512 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI ALLIS, CHARLES DAVID · 1995 to 1998
–
NIGMS NIH HHS GM40922NIGMS NIH HHS GM53512NIGMS NIH HHS GM63959NIGMS NIH HHS R01 GM040922NIGMS NIH HHS R01 GM063959NIGMS NIH HHS R37 GM053512
6 · The paper itself

Abstract

Transcription by RNA polymerase II (polII) is accompanied by dramatic changes in chromatin structure. Numerous enzymatic activities contribute to these changes, including ATP-dependent nucleosome remodeling enzymes and histone modifying enzymes. Recent studies in budding yeast document a histone modification pathway associated with polII transcription, whereby ubiquitylation of histone H2B leads to methylation of histone H3 on specific lysine residues. Although this series of events appears to be highly conserved among eukaryotes, its mechanistic function in transcription is unknown. Here we document a significant functional divergence between ubiquitylation of H2B and methylation of Lys 4 on histone H3 in the fission yeast Schizosaccharomyces pombe. Loss of H2B ubiquitylation results in defects in cell growth, septation, and nuclear structure, phenotypes not observed in cells lacking H3 Lys 4 methylation. Consistent with these results, gene expression microarray analysis reveals a greater role for H2B ubiquitylation in gene regulation than for H3 Lys 4 methylation. Chromatin immunoprecipitation (ChIP) experiments demonstrate that loss of H2B ubiquitylation alters the distribution of polII and histones in gene coding regions. We propose that ubiquitylation of H2B impacts transcription elongation and nuclear architecture through its effects on chromatin dynamics.

Indexed as

Transcription, GeneticChromatinHistone-Lysine N-MethyltransferaseHistonesMethylationRNA Polymerase IISchizosaccharomycesUbiquitinChromatinHistone-Lysine N-MethyltransferaseHistonesRNA Polymerase IIUbiquitin

Identifiers

PMID17374714
PMCPMC1838534
OpenAlexW2137081894

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.