Evidence map›Paper›PMID 17372198›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

p53 targets identified by protein expression profiling.

Rubaiyat Rahman-Roblick, Uwe Johannes Roblick, Ulf Hellman, Paolo Conrotto, Tao Liu, Susanne Becker, Daniel Hirschberg, Hans Jörnvall, Gert Auer, Klas G Wiman

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 108 citations in OpenAlex.

  1. Article
  2. Amino acid metabolism reprogramming: shedding new light on T cell anti-tumor immunity.Journal of experimental & clinical cancer research : CR · 2023
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  17. Antagonists of growth hormone-releasing hormone receptor induce apoptosis specifically in retinoblastoma cells.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  18. Regulation of the metastasis suppressor Nm23-H1 by tumor viruses.Naunyn-Schmiedeberg's archives of pharmacology · 2015
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Rubaiyat Rahman-RoblickDepartment of Oncology-Pathology, Cancer Center Karolinska, Karolinska Institutet, SE-171 76 Stockholm, Sweden.
Uwe Johannes Roblick
Ulf Hellman
Paolo Conrotto
Tao Liu
Susanne Becker
Daniel Hirschberg
Hans Jörnvall
Gert Auer
Klas G Wiman
Karolinska Institutet · SEETH Zurich · CHLudwig Cancer Research · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

p53 triggers cell cycle arrest and apoptosis through transcriptional regulation of specific target genes. We have investigated the effect of p53 activation on the proteome using 2D gel electrophoresis analysis of mitomycin C-treated HCT116 colon carcinoma cells carrying wild-type p53. Approximately 5,800 protein spots were separated in overlapping narrow-pH-range gel strips, and 115 protein spots showed significant expression changes upon p53 activation. The identity of 55 protein spots was obtained by mass spectrometry. The majority of the identified proteins have no previous connection to p53. The proteins fall into different functional categories, such as mRNA processing, translation, redox regulation, and apoptosis, consistent with the idea that p53 regulates multiple cellular pathways. p53-dependent regulation of five of the up-regulated proteins, eIF5A, hnRNP C1/C2, hnRNP K, lamin A/C, and Nm23-H1, and two of the down-regulated proteins, Prx II and TrpRS, was examined in further detail. Analysis of mRNA expression levels demonstrated both transcription-dependent and transcription-independent regulation among the identified targets. Thus, this study reveals protein targets of p53 and highlights the role of transcription-independent effects for the p53-induced biological response.

Indexed as

ApoptosisGene Expression ProfilingCell Line, TumorColonic NeoplasmsElectrophoresis, Gel, Two-DimensionalHumansHydrogen-Ion ConcentrationMass SpectrometryMitomycinNeoplasm MetastasisNeoplasmsOxidation-ReductionPromoter Regions, GeneticProteomicsTumor Suppressor Protein p53MitomycinTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID17372198
PMCPMC1828709
OpenAlexW1996153912

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.