Evidence map›Paper›PMID 17371836›Full record

ArticleThe Journal of cell biology2007

The RNA-binding protein Sam68 modulates the alternative splicing of Bcl-x.

Maria Paola Paronetto, Tilman Achsel, Autumn Massiello, Charles E Chalfant, Claudio Sette

Open access · greenAbstract read
In one paragraph

Article in The Journal of cell biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 196 papers.

0numbers the graph read from it
0cells of the map it votes in
196citing papers in PubMed
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

196 citing papers in PubMed, 336 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. An intron-based timer for circadian rhythms.bioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Review
  13. Role of Sam68 in different types of cancer (Review).International journal of molecular medicine · 2025
    Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article

136 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Maria Paola ParonettoDepartment of Public Health and Cell Biology, Section of Anatomy, University of Rome Tor Vergata, 00133 Rome, Italy.
Tilman Achsel
Autumn Massiello
Charles E Chalfant
Claudio Sette
Fondazione Santa Lucia · ITHunter Holmes McGuire VA Medical Center · USUniversity of Rome Tor Vergata · IT

Funding

The Role of Ceramide Kinase in Eicosanoid SynthesisR01HL072925 · NHLBI · VIRGINIA COMMONWEALTH UNIVERSITY · PI CHALFANT, CHARLES E. · 2004 to 2012
$3.1M
NHLBI NIH HHS R01 HL072925NHLBI NIH HHS R01HL72925Telethon GGP04118
6 · The paper itself

Abstract

The RNA-binding protein Sam68 is involved in apoptosis, but its cellular mRNA targets and its mechanism of action remain unknown. We demonstrate that Sam68 binds the mRNA for Bcl-x and affects its alternative splicing. Depletion of Sam68 by RNA interference caused accumulation of antiapoptotic Bcl-x(L), whereas its up-regulation increased the levels of proapoptotic Bcl-x(s). Tyrosine phosphorylation of Sam68 by Fyn inverted this effect and favored the Bcl-x(L) splice site selection. A point mutation in the RNA-binding domain of Sam68 influenced its splicing activity and subnuclear localization. Moreover, coexpression of ASF/SF2 with Sam68, or fusion with an RS domain, counteracted Sam68 splicing activity toward Bcl-x. Finally, Sam68 interacted with heterogenous nuclear RNP (hnRNP) A1, and depletion of hnRNP A1 or mutations that impair this interaction attenuated Bcl-x(s) splicing. Our results indicate that Sam68 plays a role in the regulation of Bcl-x alternative splicing and that tyrosine phosphorylation of Sam68 by Src-like kinases can switch its role from proapoptotic to antiapoptotic in live cells.

Indexed as

Adaptor Proteins, Signal TransducingAlternative Splicingbcl-X ProteinBinding SitesCell LineDNA-Binding ProteinsDown-RegulationHeterogeneous Nuclear Ribonucleoprotein A1Heterogeneous-Nuclear Ribonucleoprotein Group A-BHumansNuclear ProteinsPhosphorylationPoint MutationProtein IsoformsRNA-Binding ProteinsRNA, MessengerAdaptor Proteins, Signal TransducingBCL2L1 protein, humanbcl-X ProteinDNA-Binding ProteinsFYB1 protein, humanHeterogeneous Nuclear Ribonucleoprotein A1Heterogeneous-Nuclear Ribonucleoprotein Group A-BKHDRBS1 protein, humanNuclear ProteinsProtein IsoformsRNA-Binding ProteinsRNA, MessengerRNA, Small InterferingSerine-Arginine Splicing Factors

Identifiers

PMID17371836
PMCPMC2064079
OpenAlexW2155432224

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.