Evidence map›Paper›PMID 17360488›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

HIV-1 Vpr function is mediated by interaction with the damage-specific DNA-binding protein DDB1.

Bärbel Schröfelbauer, Yoshiyuki Hakata, Nathaniel R Landau

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 133 papers.

0numbers the graph read from it
0cells of the map it votes in
133citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

133 citing papers in PubMed, 184 citations in OpenAlex.

  1. Manipulation of the cell cycle by HIV-1.Biochemical Society transactions · 2026
    Review
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  4. HIV-1 Vif and Vpr cooperatively modulate the cell cycle to maximize per-cell virion production.Proceedings of the National Academy of Sciences of the United States of America · 2025
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73 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Bärbel SchröfelbauerInfectious Disease Laboratory, The Salk Institute, 10010 North Torrey Pines Road, La Jolla, CA 92037-1099, USA.
Yoshiyuki Hakata
Nathaniel R Landau
Torrey Pines Institute For Molecular Studies · US

Funding

APOBEC3G/CEM15 Inhibition of Lentivirus ReplicationR01AI058864 · NIAID · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI LANDAU, NATHANIEL R. · 2004 to 2015
$4.5M
Murine Model for HIV-1 ReplicationR01DA014494 · NIDA · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI LANDAU, NATHANIEL R. · 2001 to 2006
$2.4M
NIAID NIH HHS AI 058864-03NIAID NIH HHS R01 AI058864NIDA NIH HHS DA 014494-05NIDA NIH HHS R01 DA014494
6 · The paper itself

Abstract

The Vpr accessory protein of HIV-1 induces a response similar to that of DNA damage. In cells expressing Vpr, the DNA damage sensing kinase, ATR, is activated, resulting in G(2) arrest and apoptosis. In addition, Vpr causes rapid degradation of the uracil-DNA glycosylases UNG2 and SMUG1. Although several cellular proteins have been reported to bind to Vpr, the mechanism by which Vpr mediates its biological effects is unknown. Using tandem affinity purification and mass spectrometry, we identified a predominant cellular protein that binds to Vpr as the damage-specific DNA-binding protein 1 (DDB1). In addition to its role in the repair of damaged DNA, DDB1 is a component of an E3 ubiquitin ligase that degrades numerous cellular substrates. Interestingly, DDB1 is targeted by specific regulatory proteins of other viruses, including simian virus 5 and hepatitis B. We show that the interaction with DDB1 mediates Vpr-induced apoptosis and UNG2/SMUG1 degradation and impairs the repair of UV-damaged DNA, which could account for G(2) arrest and apoptosis. The interaction with DDB1 may explain several of the diverse biological functions of Vpr and suggests potential roles for Vpr in HIV-1 replication.

Indexed as

ApoptosisCell LineDNA-Binding ProteinsDNA DamageDNA GlycosylasesDNA RepairGene Products, vprGenes, vprHIV-1HumansProtein BindingTime FactorsUbiquitin-Protein LigasesUltraviolet Raysvpr Gene Products, Human Immunodeficiency VirusCCNO protein, humanDDB1 protein, humanDNA-Binding ProteinsDNA GlycosylasesGene Products, vprUbiquitin-Protein Ligasesvpr Gene Products, Human Immunodeficiency Virus

Identifiers

PMID17360488
PMCPMC1820720
OpenAlexW2140226886

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.