Evidence map›Paper›PMID 17360435›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex.

Joseph S Glavy, Andrew N Krutchinsky, Ileana M Cristea, Ian C Berke, Thomas Boehmer, Günter Blobel, Brian T Chait

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 95 citations in OpenAlex.

  1. CabioRxiv : the preprint server for biology · 2026
    Article
  2. Review
  3. Review
  4. Structure, function and assembly of nuclear pore complexes.Nature reviews. Molecular cell biology · 2026
    Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Maintaining Transcriptional Specificity Through Mitosis.Annual review of genomics and human genetics · 2022
    Review
  11. Article
  12. Review
  13. Review
  14. The LEM-ESCRT toolkit: Repair and maintenance of the nucleus.Frontiers in cell and developmental biology · 2022
    Review
  15. Article
  16. Review
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Joseph S GlavyLaboratories of Mass Spectrometry and Gaseous Ion Chemistry, Howard Hughes Medical Institute, The Rockefeller University, 1230 York Avenue, New York, NY 10021, USA.
Andrew N Krutchinsky
Ileana M Cristea
Ian C Berke
Thomas Boehmer
Günter Blobel
Brian T Chait
Rockefeller University · USHoward Hughes Medical Institute · USUniversity of California, San Francisco · US

Funding

YNG1 PHD BINDING TO H3 3METHYL AT K4 PROMOTES TRANSCRIPTION AT TARGETED ORFSP41RR000862 · NCRR · ROCKEFELLER UNIVERSITY · PI DARNELL, JAMES E · 1985 to 2011
$16.1M
CHARACTERIZATION OF THE GTPASE, SRBETAF32GM020520 · NIGMS · ROCKEFELLER UNIVERSITY · PI GLAVY, JOSEPH STEPHEN · 2000 to 2002
$119k
NCRR NIH HHS P41 RR000862NCRR NIH HHS RR 00862NIGMS NIH HHS F32 GM020520PHS HHS 5F32 GN 20520
6 · The paper itself

Abstract

The nuclear pore complex (NPC) mediates macromolecular transport between the nucleus and the cytoplasm. Many NPC proteins (nucleoporins, Nups) are modified by phosphorylation. It is believed that phosphorylation regulates the breakdown of the nuclear envelope at mitosis and the disassembly of the NPC into different subcomplexes. In this study, we examined the cell-cycle-dependent phosphorylation of the Nup107-160 subcomplex, a core building block of the NPC. Using in vivo (32)P labeling in HeLa cells, we found that Nup107, Nup96, and Nup133 are phosphorylated during mitosis. To precisely map the phosphorylation sites within the complex, we used a comprehensive multiple-stage MS approach (MS, MS(2), and MS(3)), establishing that Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. We determined that the phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. In addition, we determined the cell-cycle dependence of the phosphorylation of these sites by using stable isotope labeling and MS(2) analysis. Measurement of the site-specific phosphorylation ratios between mitotic and G(1) cells led us to conclude that several phosphorylation events of the subcomplex are mainly mitotic. Based on these results and our finding that the entire Nup107-160 subcomplex is stable throughout the cell cycle, we propose that phosphorylation does not affect interactions within the Nup107-160 subcomplex, but regulates the association of the subcomplex with the NPC and other proteins.

Indexed as

Cell CycleAmino Acid SequenceCell NucleusCytoplasmHeLa CellsHumansMass SpectrometryMitosisMolecular Sequence DataNuclear PoreNuclear Pore Complex ProteinsNuclear ProteinsPhosphorylationProtein BindingProtein Structure, TertiaryNuclear Pore Complex ProteinsNuclear ProteinsNUP107 protein, humanNUP160 protein, human

Identifiers

PMID17360435
PMCPMC1820666
OpenAlexW2040734101

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.