Evidence map›Paper›PMID 17360333›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Stage-dependent reactivity of thymocytes to self-peptide--MHC complexes.

Qibin Leng, Qing Ge, Tam Nguyen, Herman N Eisen, Jianzhu Chen

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Early expression of mature αβ TCR in CD4Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  2. Article
  3. Subcellular distribution of Lck during CD4 T-cell maturation in the thymic medulla regulates the T-cell activation threshold.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Qibin LengCenter for Cancer Research and Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Qing Ge
Tam Nguyen
Herman N Eisen
Jianzhu Chen
Massachusetts Institute of Technology · USCenter for Cancer Research · US

Funding

Control of V(D)J Recombination at the TCR beta LocusR01AI040146 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHEN, JIANZHU · 1997 to 2007
$2.1M
Regulation of Ras signaling by the ubiquitin pathwayR01CA140451 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI PFLEGER, CATHIE M · 2009 to 2013
$1.6M
Regulation of T Cell HomeostasisR01AI050631 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHEN, JIANZHU · 2002 to 2006
$1.6M
PEPTIDES/MHC I COMPLEXES AND CD8+ T CELLSR01CA060686 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI EISEN, HERMAN N · 1993 to 2004
$1.3M
NCI NIH HHS CA140451NCI NIH HHS CA60686NCI NIH HHS R01 CA060686NCI NIH HHS R01 CA140451NIAID NIH HHS AI40146NIAID NIH HHS AI50631NIAID NIH HHS R01 AI040146NIAID NIH HHS R01 AI050631
6 · The paper itself

Abstract

In mice that express a transgene for the 2C T cell antigen-receptor (TCR) and lack a recombinase-activating gene (2C(+)RAG(-/-) mice) most of the peripheral T cells are CD8(+), a few are CD4(+), and a significant fraction are CD4(-)CD8(-) [double negative (DN)]. The DN 2C cells, like DN T cells that are abundant in various other alphabeta TCR-transgenic mice, appear to be derived directly from DN thymocytes that prematurely express the TCR transgene. The DN 2C cells are virtually absent in mice deficient in major histocompatibility complex class II (MHC-II) but more abundant in mice deficient in MHC-I, suggesting that the DN 2C thymocytes are positively selected by self-peptide-MHC-II (pMHC-II) complexes and negatively selected by self-pMHC-I complexes. The pMHC-I complexes, however, positively select CD8(+) 2C T cells in the same mice. The different effects of thymic pMHC-I on DN and CD8(+) thymocytes are consistent with the finding that DN 2C thymocytes are more sensitive than more mature CD4(+)CD8(+) [double positive (DP)] thymocytes to a weak pMHC-I agonist for the 2C TCR. Together with previous evidence that DP thymocytes respond more sensitively than T cells in the periphery to weak pMHC agonists, the findings suggest progressive decreases in responsiveness to self-pMHC-I complexes as thymocytes develop from DN to DP thymocytes and then to mature naïve T cells in the periphery.

Indexed as

AnimalsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 2AutoantigensCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesCell LineageHistocompatibility Antigens Class IHistocompatibility Antigens Class IIHomeodomain ProteinsMicePeptidesSpleenThymus GlandATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 2AutoantigensHistocompatibility Antigens Class IHistocompatibility Antigens Class IIHomeodomain ProteinsPeptidesRAG-1 proteinTap1 protein, mouse

Identifiers

PMID17360333
PMCPMC1829260
OpenAlexW2008206880

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.