Evidence map›Paper›PMID 17360324›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

A genomic screen for activators of the antioxidant response element.

Yanxia Liu, Jonathan T Kern, John R Walker, Jeffrey A Johnson, Peter G Schultz, Hendrik Luesch

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 191 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Slingshot homolog-1-mediated Nrf2 sequestration tips the balance from neuroprotection to neurodegeneration in Alzheimer's disease.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. AJournal of fungi (Basel, Switzerland) · 2021
    Article
  20. Article

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Yanxia LiuDepartment of Medicinal Chemistry, University of Florida, 1600 Southwest Archer Road, Gainesville, FL 32610, USA.
Jonathan T Kern
John R Walker
Jeffrey A Johnson
Peter G Schultz
Hendrik Luesch
University of Florida · USUniversity of Wisconsin–Madison · USGenomics Institute of the Novartis Research Foundation · USScripps Research Institute · US

Funding

The Nrf2-ARE pathway in modulating Parkinson's DiseaseR01ES010042 · NIEHS · UNIVERSITY OF WISCONSIN-MADISON · PI JOHNSON, JEFFREY A · 2001 to 2010
$4.0M
Transcriptional Control of Antioxidant Genes in BrainR01ES008089 · NIEHS · UNIVERSITY OF WISCONSIN-MADISON · PI JOHNSON, JEFFREY A · 2002 to 2013
$3.7M
BRAIN GLUTATHIONE S-TRANSFERASES AND NEUROTOXICITYR29ES008089 · NIEHS · UNIVERSITY OF WISCONSIN MADISON · PI JOHNSON, JEFFREY A · 1996 to 2000
$104k
NIEHS NIH HHS ES08089NIEHS NIH HHS ES10042NIEHS NIH HHS R01 ES008089NIEHS NIH HHS R01 ES010042NIEHS NIH HHS R29 ES008089
6 · The paper itself

Abstract

The antioxidant response element (ARE) is a cis-acting regulatory enhancer element found in the 5' flanking region of many phase II detoxification enzymes. Up-regulation of ARE-dependent target genes is known to have neuroprotective effects; yet, the mechanism of activation is largely unknown. By screening an arrayed collection of approximately 15,000 full-length expression cDNAs in the human neuroblastoma cell line IMR-32 with an ARE-luciferase reporter, we have identified several cDNAs not previously associated with ARE activation. A subset of cDNAs, encoding sequestosome 1 (SQSTM1) and dipeptidylpeptidase 3 (DPP3), activated the ARE in primary mouse-derived cortical neurons. Overexpression of SQSTM1 and DPP3 in IMR-32 cells stimulated NF-E2-related factor 2 (NRF2) nuclear translocation and led to increased levels of NAD(P)H:quinone oxidoreductase 1, a protein which is transcriptionally regulated by the ARE. When transfected into IMR-32 neuroblastoma cells that were depleted of transcription factor NRF2 by RNA interference, SQSTM1 and DPP3 were unable to activate the ARE or induce NAD(P)H:quinone oxidoreductase 1 expression, indicating that the ARE activation upon ectopic expression of these cDNAs is mediated by NRF2. Studies with pharmacological inhibitors indicated that 1-phosphatidylinositol 3-kinase and protein kinase C signaling are essential for activity. Overexpression of these cDNAs conferred partial resistance to hydrogen peroxide or rotenone-induced toxicity, consistent with the induction of antioxidant and phase II detoxification enzymes, which can protect from oxidative stress. This work and other such studies may provide mechanisms for activating the ARE in the absence of general oxidative stress and a yet-unexploited therapeutic approach to degenerative diseases and aging.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsAntioxidantsCell NucleusCells, CulturedCerebral CortexDNA, ComplementaryEnzyme InductionGene ExpressionGene LibraryGenomeGenomicsHeat-Shock ProteinsMiceNADPH DehydrogenaseNAD(P)H Dehydrogenase (Quinone)Adaptor Proteins, Signal TransducingAntioxidantsDNA, ComplementaryHeat-Shock ProteinsNADPH DehydrogenaseNAD(P)H Dehydrogenase (Quinone)NF-E2-Related Factor 2Nqo1 protein, mouseProtein Kinase InhibitorsRNA, Small InterferingSequestosome-1 ProteinSqstm1 protein, mouseTrans-Activators

Identifiers

PMID17360324
PMCPMC1829287
OpenAlexW2147984935

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.