Evidence map›Paper›PMID 17356869›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2007

Fine mapping of the Pc locus of Sorghum bicolor, a gene controlling the reaction to a fungal pathogen and its host-selective toxin.

Ervin D Nagy, Tso-Ching Lee, Wusirika Ramakrishna, Zijun Xu, Patricia E Klein, Phillip SanMiguel, Chiu-Ping Cheng, Jingling Li, Katrien M Devos, Keith Schertz and 2 more

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Positional cloning of ds1, the target leaf spot resistance gene against Bipolaris sorghicola in sorghum.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011
    Article
  10. Article
  11. Exploiting rice-sorghum synteny for targeted development of EST-SSRs to enrich the sorghum genetic linkage map.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2009
    Article
  12. Article
  13. Plant disease susceptibility conferred by a "resistance" gene.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Ervin D NagyDepartment of Genetics, University of Georgia, Athens, GA, 30602, USA.
Tso-Ching Lee
Wusirika Ramakrishna
Zijun Xu
Patricia E Klein
Phillip SanMiguel
Chiu-Ping Cheng
Jingling Li
Katrien M Devos
Keith Schertz
Larry Dunkle
Jeffrey L Bennetzen
Purdue University West Lafayette · USUniversity of Georgia · USMichigan Technological University · USTexas A&M University · USAgricultural Research Service · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Milo disease in sorghum is caused by isolates of the soil-borne fungus Periconia circinata that produce PC-toxin. Susceptibility to milo disease is conditioned by a single, semi-dominant gene, termed Pc. The susceptible allele (Pc) converts to a resistant form (pc) spontaneously at a gametic frequency of 10(-3) to 10(-4). A high-density genetic map was constructed around the Pc locus using DNA markers, allowing the Pc gene to be delimited to a 0.9 cM region on the short arm of sorghum chromosome 9. Physically, the Pc-region was covered by a single BAC clone. Sequence analysis of this BAC revealed twelve gene candidates. Several of the predicted genes in the region are homologous to disease resistance loci, including one NBS-LRR resistance gene analogue that is present in multiple tandem copies. Analysis of pc isolines derived from Pc/Pc sorghum suggests that one or more members of this NBS-LRR gene family are the Pc genes that condition susceptibility.

Indexed as

Genes, PlantPhysical Chromosome MappingAllelesAmino Acid SequenceAscomycotaChromosomes, Artificial, BacterialChromosomes, PlantCloning, MolecularCrosses, GeneticDNA, PlantGene DosageGene DuplicationGenes, DominantGenetic MarkersGenotypeMolecular Sequence DataDNA, PlantGenetic MarkersToxins, Biological

Identifiers

PMID17356869
OpenAlexW2059922788

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.