ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2007
Genome mapping of white clover (Trifolium repens L.) and comparative analysis within the Trifolieae using cross-species SSR markers.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed.
- Local landraces of white clover (Trifolium repens L.) from northwestern Spain by evaluating cyanogenesis, agromorphological characteristics and microsatellites.Scientific reports · 2025Article
- Comprehensive Identification of the β-Amylase (BAM) Gene Family in Response to Cold Stress in White Clover.Plants (Basel, Switzerland) · 2024Article
- Genome-wide analysis of the CDPK gene family and their important roles response to cold stress in white clover.Plant signaling & behavior · 2023Article
- Full-length transcriptome of inFrontiers in genetics · 2022Article
- Chromosome and Genome Diversity in the GenusPlants (Basel, Switzerland) · 2021Review
- Genetic diversity and population structure analysis in a large collection of white clover (PeerJ · 2021Article
- Linkage Map Development by EST-SSR Markers and QTL Analysis for Inflorescence and Leaf Traits in Chrysanthemum (Plants (Basel, Switzerland) · 2020Article
- Genetic diversity between two Egyptian clover varieties and QTL analysis for some agro-morphological traits.Molecular biology reports · 2019Article
- Understanding the Complexity of Cold Tolerance in White Clover using Temperature Gradient Locations and a GWAS Approach.The plant genome · 2018Article
- Structure, evolution, and comparative genomics of tetraploid cotton based on a high-density genetic linkage map.DNA research : an international journal for rapid publication of reports on genes and genomes · 2016Article
- The application of biotechnology in medicinal plants breeding research in China.Chinese journal of integrative medicine · 2015Review
- Molecular breeding in Brassica for salt tolerance: importance of microsatellite (SSR) markers for molecular breeding in Brassica.Frontiers in plant science · 2015Review
- Article
- Transferability of molecular markers from major legumes to Lathyrus spp. for their application in mapping and diversity studies.Molecular biology reports · 2014Article
- An integrated genetic linkage map for white clover (Trifolium repens L.) with alignment to Medicago.BMC genomics · 2013Article
- Comparative Genetic Mapping and Discovery of Linkage Disequilibrium Across Linkage Groups in White Clover (Trifolium repens L.).G3 (Bethesda, Md.) · 2012Article
- The genetic location of the self-incompatibility locus in white clover (Trifolium repens L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010Article
- Identification of genetic factors influencing salt stress tolerance in white clover (Trifolium repens L.) by QTL analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010Article
- Identification of homologous, homoeologous and paralogous sequence variants in an outbreeding allopolyploid species based on comparison with progenitor taxa.Molecular genetics and genomics : MGG · 2008Article
- Genome-wide identification of microsatellites in white clover (Trifolium repens L.) using FIASCO and phpSSRMiner.Plant methods · 2008Article
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Allotetraploid white clover (Trifolium repens L.), a cool-season perennial legume used extensively as forage for livestock, is an important target for marker-assisted breeding. A genetic linkage map of white clover was constructed using simple sequence repeat (SSR) markers based on sequences from several Trifolieae species, including white clover, red clover (T. pratense L.), Medicago truncatula (Gaertn.) and soybean (Glycine max L.). An F(1) population consisting of 179 individuals, from a cross between two highly heterozygous genotypes, GA43 and Southern Regional Virus Resistant, was used for genetic mapping. A total of 1,571 SSR markers were screened for amplification and polymorphism using DNA from two parents and 14 F(1)s of the mapping population. The map consists of 415 loci amplified from 343 SSR primer pairs, including 83 from white clover, 181 from red clover, 77 from M. truncatula, and two from soybean. Linkage groups for all eight homoeologous chromosome pairs of allotetraploid white clover were detected. Map length was estimated at 1,877 cM with 87% genome coverage. Map density was approximately 5 cM per locus. Segregation distortion was detected in six segments of the genome (homoeologous groups A1, A2, B1, B2, C1, and D1). A comparison of map locations of markers originating from white clover, red clover, and alfalfa (M. sativa L.) revealed putative macro-colinearity between the three Trifolieae species. This map can be used to link quantitative trait loci with SSR markers, and accelerate the improvement of white clover by marker-assisted selection and breeding.
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