Evidence map›Paper›PMID 17353990›Full record

ArticleJournal of plant research2007

Phylogenetic analysis of the genus Petunia (Solanaceae) based on the sequence of the Hf1 gene.

Sumei Chen, Kiyoshi Matsubara, Takahiro Omori, Hisashi Kokubun, Hiroaki Kodama, Hitoshi Watanabe, Goro Hashimoto, Eduardo Marchesi, Laura Bullrich, Toshio Ando

Abstract read
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Article in Journal of plant research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 41 citations in OpenAlex.

  1. The GenusPlants (Basel, Switzerland) · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Evaluation of pollen tube growth ability inPlant biotechnology (Tokyo, Japan) · 2022
    Article
  7. Stable Plastid Transformation of Petunia for Studies in Basic Research.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  8. Plants (Basel, Switzerland) · 2019
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 3 countries.

Sumei ChenGraduate School of Science and Technology, Chiba University, Chiba, Japan.
Kiyoshi Matsubara
Takahiro Omori
Hisashi Kokubun
Hiroaki Kodama
Hitoshi Watanabe
Goro Hashimoto
Eduardo Marchesi
Laura Bullrich
Toshio Ando
Chiba University · JPUniversidad La República · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polymerase chain reaction fragment length polymorphisms and nucleotide sequences for a cytochrome P450 gene encoding flavonoid-3',5'-hydroxylase, Hf1, were studied in 19 natural taxa of Petunia. Natural Petunia taxa were classified into six groups based on major insertion or deletion events that occurred only in intron II of the locus. The maximum parsimony method was used to calculate strict consensus trees based on nucleotide sequences in selected regions of the Hf1 locus. Petunia taxa were divided into two major clades in the phylogenetic trees. Petunia axillaris (including three subspecies), P. exserta, and P. occidentalis formed a clade with 100% bootstrap support. This clade is associated with a consistently inflexed pedicel, self-compatibility in most taxa, and geographical distribution in southern and western portions of the genus range. The other clade, which comprised the remainder of the genus is, however, less supported (up to 71% bootstrap); it is characterized by a deflexed pedicel in the fruiting state (except P. inflata), self-incompatibility, and a northeastern distribution. A nuclear gene, Hf1, seems to be a useful molecular marker for elucidating the phylogeny of the genus Petunia when compared with the nucleotide sequence of trnK intron of chloroplast DNA.

Indexed as

Base SequenceCytochrome P-450 Enzyme SystemDNA, PlantExonsGeographyIntronsMixed Function OxygenasesPetuniaPhylogenyPlant ProteinsPolymerase Chain ReactionPolymorphism, GeneticSeedsSequence DeletionSouth AmericaCytochrome P-450 Enzyme SystemDNA, Plantflavonoid 3',5'-hydroxylaseMixed Function OxygenasesPlant Proteins

Identifiers

PMID17353990
OpenAlexW1993468624

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.