Evidence map›Paper›PMID 17351763›Full record

ArticleJournal of molecular medicine (Berlin, Germany)2007

RNAi-dependent and -independent antiviral phenotypes of chromosomally integrated shRNA clones: role of VASP in respiratory syncytial virus growth.

Alla Musiyenko, Vira Bitko, Sailen Barik

Abstract read
In one paragraph

Article in Journal of molecular medicine (Berlin, Germany), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. RNAi Therapeutic Platforms for Lung Diseases.Pharmaceuticals (Basel, Switzerland) · 2013
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Alla MusiyenkoDepartment of Biochemistry and Molecular Biology, College of Medicine, University of South Alabama, 307 University Blvd., Mobile, AL 36688-0002, USA.
Vira Bitko
Sailen Barik
University of South Alabama · US

Funding

Mechanisms of RNA virus-host interactionR01AI059267 · NIAID · UNIVERSITY OF SOUTH ALABAMA · PI BARIK, SAILEN · 2005 to 2009
$1.2M
NIAID NIH HHS AI059267NIAID NIH HHS R01 AI059267
6 · The paper itself

Abstract

Stable RNA interference (RNAi) is commonly achieved by recombinant expression of short hairpin RNA (shRNA). To generate virus-resistant cell lines, we cloned a shRNA cassette against the phosphoprotein gene of respiratory syncytial virus (RSV) into a polIII-driven plasmid vector. Analysis of individual stable transfectants showed a spectrum of RSV resistance correlating with the levels of shRNA expressed from different chromosomal locations. Interestingly, resistance in a minority of clones was due to mono-allelic disruption of the cellular gene for vasodilator-stimulated phosphoprotein (VASP). Thus, pure clones of chromosomally integrated DNA-directed RNAi can exhibit gene disruption phenotypes resembling but unrelated to RNAi.

Indexed as

ImmunityRNA InterferenceBase SequenceCell Adhesion MoleculesChromosomes, HumanCloning, MolecularGenetic VectorsHeLa CellsHumansMicrofilament ProteinsOligodeoxyribonucleotidesPhosphoproteinsRespiratory Syncytial VirusesRNA, Small InterferingTransfectionVasodilator-Stimulated PhosphoproteinCell Adhesion MoleculesMicrofilament ProteinsOligodeoxyribonucleotidesPhosphoproteinsRNA, Small InterferingVasodilator-Stimulated Phosphoprotein

Identifiers

PMID17351763
PMCPMC3263383
OpenAlexW2110743427

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.