Evidence map›Paper›PMID 17350276›Full record

ArticleNeurobiology of disease2007

Identification of photoreceptor genes affected by PRPF31 mutations associated with autosomal dominant retinitis pigmentosa.

Daniel Mordes, Liya Yuan, Lili Xu, Mariko Kawada, Robert S Molday, Jane Y Wu

Open access · greenAbstract read
In one paragraph

Article in Neurobiology of disease, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Article
  3. Hub Genes PRPF19 and PPIB: Molecular Pathways and Potential Biomarkers in COPD.International journal of chronic obstructive pulmonary disease · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. A CombinedFrontiers in genetics · 2019
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. RNA and disease.Cell · 2009
    Review
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 6 institutions in 2 countries.

Daniel MordesDepartment of Pediatrics, John F. Kennedy Center for Research on Human Development, Vanderbilt University Medical Center, USA.
Liya Yuan
Lili Xu
Mariko Kawada
Robert S Molday
Jane Y Wu
John F. Kennedy Center for the Performing Arts · USNorthwestern University · USRobert H. Lurie Comprehensive Cancer Center of Northwestern UniversityUniversity of British Columbia · CAVanderbilt University Medical Center · USWashington University in St. Louis · US

Funding

Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Kevin L Schey · 1989 to 2026
$19.6M
STRUCTURE/FUNCTION OF ROS PLASMA MEMBRANE PROTEINSR01EY002422 · NEI · UNIVERSITY OF BRITISH COLUMBIA · PI MOLDAY, ROBERT S · 1985 to 2017
$3.5M
Pre-mRNA Splicing Defects and Retinal DegenerationR01EY014576 · NEI · VANDERBILT UNIVERSITY · PI WU, JANE Y · 2004 to 2008
$1.8M
THE ROLE OF ALTERNATIVE SPLICING IN NEURODEGENERATIONR01AG017518 · NIA · WASHINGTON UNIVERSITY · PI WU, JANE Y · 1999 to 2003
$1.5M
Slit Signaling in Breast CancerR01CA114197 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WU, JANE Y · 2006 to 2010
$1.3M
Alternative splicing regulation of caspase-2 geneR01GM070967 · NIGMS · VANDERBILT UNIVERSITY · PI WU, JANE Y · 2005 to 2008
$939k
NCI NIH HHS R01 CA114197NEI NIH HHS EY014576NEI NIH HHS EY02422NEI NIH HHS EY08126NEI NIH HHS P30 EY008126NEI NIH HHS R01 EY002422NEI NIH HHS R01 EY014576NIA NIH HHS AG17518NIA NIH HHS R01 AG017518NIGMS NIH HHS GM07967NIGMS NIH HHS R01 GM070967
6 · The paper itself

Abstract

Several ubiquitously expressed genes encoding pre-mRNA splicing factors have been associated with autosomal dominant retinitis pigmentosa (adRP), including PRPF31, PRPF3 and PRPF8. Molecular mechanisms by which defects in pre-mRNA splicing factors cause photoreceptor degeneration are not clear. To investigate the role of pre-mRNA splicing in photoreceptor gene expression and function, we have begun to search for photoreceptor genes whose pre-mRNA splicing is affected by mutations in PRPF31. Using an immunoprecipitation-coupled-microarray method, we identified a number of transcripts associated with PRPF31-containing complexes, including peripherin/RDS, FSCN2 and other photoreceptor-expressed genes. We constructed minigenes to study the effects of PRPF31 mutations on the pre-mRNA splicing of these photoreceptor specific genes. Our experiments demonstrated that mutant PRPF31 significantly inhibited pre-mRNA splicing of RDS and FSCN2. These observations suggest a functional link between ubiquitously expressed and retina-specifically expressed adRP genes. Our results indicate that PRPF31 mutations lead to defective pre-mRNA splicing of photoreceptor-specific genes and that the ubiquitously expressed adRP gene, PRPF31, is critical for pre-mRNA splicing of a subset of photoreceptor genes. Our results provide an explanation for the photoreceptor-specific phenotype of PRPF31 mutations.

Indexed as

Alternative SplicingAnimalsAnimals, NewbornCarrier ProteinsCell LineCells, CulturedChickensChromosome DisordersEye ProteinsGene Expression Regulation, DevelopmentalGenes, DominantGenetic Predisposition to DiseaseHumansIntermediate Filament ProteinsMembrane GlycoproteinsMiceCarrier ProteinsEye ProteinsfascinIntermediate Filament ProteinsMembrane GlycoproteinsMicrofilament ProteinsNerve Tissue ProteinsPeripherinsPRPF31 protein, humanPRPH2 protein, humanPrph2 protein, mousePRPH protein, humanRNA Precursors

Identifiers

PMID17350276
PMCPMC2014719
OpenAlexW2057205033

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.