Evidence map›Paper›PMID 17343762›Full record

ArticleBMC microbiology2007

Characterization of Escherichia coli MG1655 grown in a low-shear modeled microgravity environment.

Don L Tucker, C Mark Ott, Stephen Huff, Yuriy Fofanov, Duane L Pierson, Richard C Willson, George E Fox

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
  2. Evaluation of theFrontiers in bioengineering and biotechnology · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Phenotypic, genomic, and transcriptomic changes in an Acinetobacter baumannii strain after spaceflight in China's Tiangong-2 space laboratory.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Article
  8. Article
  9. Growth Behavior and Transcriptome Profile Analysis ofPolish journal of microbiology · 2022
    Article
  10. Combined Impact of Magnetic Force and Spaceflight Conditions onInternational journal of molecular sciences · 2022
    Article
  11. Changes in Higher-Order Chromosomal Structure ofFrontiers in microbiology · 2022
    Article
  12. Spaceflight Analogue Culture Enhances the Host-Pathogen Interaction BetweenFrontiers in cellular and infection microbiology · 2022
    Article
  13. Review
  14. Review
  15. Article
  16. Transcriptional Profiling of the ProbioticInternational journal of molecular sciences · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Don L TuckerUniversity of Houston, Department of Biology & Biochemistry, Houston, TX 77204-5001, USA. dtucker84@yahoo.com <dtucker84@yahoo.com>
C Mark Ott
Stephen Huff
Yuriy Fofanov
Duane L Pierson
Richard C Willson
George E Fox
University of Houston · USJohnson Space Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundExtra-cellular shear force is an important environmental parameter that is significant both medically and in the space environment. Escherichia coli cells grown in a low-shear modeled microgravity (LSMMG) environment produced in a high aspect rotating vessel (HARV) were subjected to transcriptional and physiological analysis.

resultsAerobic LSMMG cultures were grown in rich (LB) and minimal (MOPS + glucose) medium with a normal gravity vector HARV control. Reproducible changes in transcription were seen, but no specific LSMMG responsive genes were identified. Instead, absence of shear and a randomized gravity vector appears to cause local extra-cellular environmental changes, which elicit reproducible cellular responses. In minimal media, the majority of the significantly up- or down-regulated genes of known function were associated with the cell envelope. In rich medium, most LSMMG down-regulated genes were involved in translation. No observable changes in post-culture stress responses and antibiotic sensitivity were seen in cells immediately after exposure to LSMMG. Comparison with earlier studies of Salmonella enterica serovar Typhimurium conducted under similar growth conditions, revealed essentially no similarity in the genes that were significantly up- or down-regulated.

conclusionComparison of these results to previous studies suggests that different organisms may dramatically differ in their responses to medically significant low-shear and space environments. Depending on their specific response, some organisms, such as Salmonella, may become preadapted in a manner that predisposes them to increased virulence.

Indexed as

WeightlessnessAerobiosisAnti-Bacterial AgentsCulture MediaEscherichia coliGene Expression Regulation, BacterialModels, BiologicalOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionAnti-Bacterial AgentsCulture Media

Identifiers

PMID17343762
PMCPMC1852313
OpenAlexW2068846358

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.