Evidence map›Paper›PMID 17335590›Full record

ArticleBMC microbiology2007

New probes used for IS1245 and IS1311 restriction fragment length polymorphism of Mycobacterium avium subsp. avium and Mycobacterium avium subsp. hominissuis isolates of human and animal origin in Norway.

Tone Bjordal Johansen, Ingrid Olsen, Merete Rusås Jensen, Ulf R Dahle, Gudmund Holstad, Berit Djønne

Abstract read
In one paragraph

Article in BMC microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Article
  3. Pathological and molecular identification of Mycobacterium avium infection in a loft of domestic pigeons (Columba livia var. domestica) from India.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
    Article
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  6. Avian Mycobacteriosis and Molecular Identification ofAnimals : an open access journal from MDPI · 2021
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  7. Genomic features ofGigaByte (Hong Kong, China) · 2021
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  8. Current clinical microbiology reports · 2020
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  9. Differential Genotyping ofMicroorganisms · 2020
    Review
  10. Article
  11. Article
  12. Identification of Prophages within theAdvances in microbiology · 2016
    Article
  13. Review
  14. Genotyping ofInternational journal of bacteriology · 2016
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Diversity of Mycobacterium avium subsp. hominissuis mycobacteria causing lymphadenitis, France.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2012
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tone Bjordal JohansenDepartment of Animal Health, National Veterinary Institute, Oslo, Norway. tone.bjordal-johansen@vetinst.no <tone.bjordal-johansen@vetinst.no>
Ingrid Olsen
Merete Rusås Jensen
Ulf R Dahle
Gudmund Holstad
Berit Djønne

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMycobacterium avium is an environmental mycobacterium that can be divided into the subspecies avium, hominissuis, paratuberculosis and silvaticum. Some M. avium subspecies are opportunistic pathogens for animals and humans. They are ubiquitous in nature and can be isolated from natural sources of water, soil, plants and bedding material. Isolates of M. avium originating from humans (n = 37), pigs (n = 51) and wild birds (n = 10) in Norway were examined by IS1245 and IS1311 RFLP using new and specific probes and for the presence of IS901 and ISMpa1 by PCR. Analysis and generation of a dendrogram were performed with the software BioNumerics.

resultsIS1311 RFLP provided clear results that were easy to interpret, while IS1245 RFLP generated more complex patterns with a higher discriminatory power. The combination of the two methods gave additional discrimination between isolates. All avian isolates except one were M. avium subsp. avium with two copies of IS1311 and one copy of IS1245, while the isolates of human and porcine origin belonged to M. avium subsp.hominissuis. The isolates from human patients were distributed randomly among the clusters of porcine isolates. There were few identical isolates. However, one isolate from a human patient was identical to a porcine isolate. Regional differences were detected among the porcine isolates, while there was no clustering of human isolates according to type of clinical symptoms or geographical location of the patient's home addresses.

conclusionThe results demonstrate that a wide range of M. avium subsp.hominissuis are present in pigs and humans in Norway, and that some of these isolates are very similar. It remains to be determined whether humans are infected from pigs or if they are infected from common environmental sources.

Indexed as

Polymorphism, Restriction Fragment LengthAnimalsBirdsCluster AnalysisHumansMycobacterium aviumNorwayPolymerase Chain ReactionSwineSwine DiseasesTuberculosisTuberculosis, Avian

Identifiers

PMID17335590
PMCPMC1821328

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.