Evidence map›Paper›PMID 17334841›Full record

ArticleCurrent microbiology2007

Genetic and comparative transcriptome analysis of bromodomain factor 1 in the salt stress response of Saccharomyces cerevisiae.

Xiangyong Liu, Xiaohua Zhang, Chao Wang, Liangyu Liu, Ming Lei, Xiaoming Bao

Abstract read
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In one paragraph

Article in Current microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

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  9. The capacity ofFungal biology and biotechnology · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Xiangyong LiuState Key Laboratory of Microbial Technology, Shandong University, Jinan, 250100, P.R. China, bxm@sdu.edu.cn.
Xiaohua Zhang
Chao Wang
Liangyu Liu
Ming Lei
Xiaoming Bao
Shandong University · CNState Key Laboratory of Microbial TechnologyMedical College of Wisconsin · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Saccharomyces cerevisiae BDF1 gene, which encodes a bromodomain-containing transcription factor, was previously isolated by transposon mutugenesis in a screen for salt-sensitive mutants. However, the salt stress response mechanism regulated by bromodomain transcription factor 1 protein (Bdf1p) remains poorly understood. In this report, genetic analysis indicated that the salt sensitivity of the BDF1 deletion mutant was suppressed by increased gene dosage of its homologous gene BDF2. Furthermore, comparative transcriptome analysis revealed that the differences in transcriptional response between the wild type and the bdf1Delta mutant in the presence of salt stress (0.6 mol/L NaCl, 45 min) were mainly related to cell-wall biosynthesis, the mitochondria, and several unknown genes. Our results provided further information about the regulatory mechanism involved in the salt stress response and adds new insight for understanding the biological functional of bromdomain-containing proteins in cellular processes.

Indexed as

Bromodomain Containing ProteinsGene DosageGene Expression ProfilingGene Expression Regulation, FungalGenes, FungalGenotypeMutationOligonucleotide Array Sequence AnalysisPhenotypeSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSodium ChlorideTranscription FactorsTranscription, GeneticBDF1 protein, S cerevisiaeBromodomain Containing ProteinsSaccharomyces cerevisiae ProteinsSodium ChlorideTranscription Factors

Identifiers

PMID17334841
OpenAlexW1982294654

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.