Evidence map›Paper›PMID 17331771›Full record

ArticleComparative biochemistry and physiology. Part B, Biochemistry & molecular biology2007

Isolation and characterization of axolotl NPDC-1 and its effects on retinoic acid receptor signaling.

Maria Theodosiou, James R Monaghan, Michael L Spencer, S Randal Voss, Daniel J Noonan

Open access · greenAbstract readComparative Study
In one paragraph

Article in Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Phenotypical manifestations of partial trisomy 9 and monosomy 4 in two siblings.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Maria TheodosiouDepartment of Molecular and Cellular Biochemistry, University of Kentucky, 741 South Limestone Ave., Lexington, KY 40536, USA.
James R Monaghan
Michael L Spencer
S Randal Voss
Daniel J Noonan
University of Kentucky · USCincinnati Children's Hospital Medical Center · US

Funding

GENOME RESOURCES FOR MODEL AMPHIBIANSR24RR016344 · NCRR · UNIVERSITY OF KENTUCKY · PI VOSS, STEPHEN RANDAL · 2002 to 2011
$3.5M
Dissecting the Molecular Pathology of LAM DiseaseR01HL067321 · NHLBI · UNIVERSITY OF KENTUCKY · PI NOONAN, DANIEL J · 2002 to 2005
$1.2M
NCRR NIH HHS 5-R24-RR016344-06NCRR NIH HHS R24 RR016344NHLBI NIH HHS HL67321NHLBI NIH HHS R01 HL067321
6 · The paper itself

Abstract

Retinoic acid, a key morphogen in early vertebrate development and tissue regeneration, mediates its effects through the binding of receptors that act as ligand-induced transcription factors. These binding events function to recruit an array of transcription co-regulatory proteins to specific gene promoters. One such co-regulatory protein, neuronal proliferation and differentiation control-1 (NPDC-1), is broadly expressed during mammalian development and functions as an in vitro repressor of retinoic acid receptor (RAR)-mediated transcription. To obtain comparative and developmental insights about NPDC-1 function, we cloned the axolotl (Ambystoma mexicanum) orthologue and measured transcript abundances among tissues sampled during the embryonic and juvenile phases of development, and also during spinal cord regeneration. Structurally, the axolotl orthologue of NPDC-1 retained sequence identity to mammalian sequences in all functional domains. Functionally, we observed that axolotl NPDC-1 mRNA expression peaked late in embryogenesis, with highest levels of expression occurring during the time of limb development, a process regulated by retinoic acid signaling. Also similar to what has been observed in mammals, axolotl NPDC-1 directly interacts with axolotl RAR, modulates axolotl RAR DNA binding, and represses cell proliferation and axolotl RAR-mediated gene transcription. These data justify axolotl as a model to further investigate NPDC-1 and its role in regulating retinoic acid signaling.

Indexed as

Ambystoma mexicanumAmino Acid SequenceAnalysis of VarianceAnimalsBase SequenceBlotting, WesternCell LineCloning, MolecularDNA PrimersGene Expression ProfilingHumansMolecular Sequence DataNerve Tissue ProteinsProtein BindingReceptors, Retinoic AcidReverse Transcriptase Polymerase Chain ReactionDNA PrimersNerve Tissue ProteinsReceptors, Retinoic Acid

Identifiers

PMID17331771
PMCPMC2683337
OpenAlexW2017616047

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.