ArticleJournal of the American Medical Informatics Association : JAMIA
NeuroExtract: facilitating neuroscience-oriented retrieval from broadly-focused bioscience databases using text-based query mediation.
Article in Journal of the American Medical Informatics Association : JAMIA. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
4 citing papers in PubMed.
- Integration of Neuroimaging and Microarray Datasets through Mapping and Model-Theoretic Semantic Decomposition of Unstructured Phenotypes.Cancer informatics · 2009Article
- Automated recognition of brain region mentions in neuroscience literature.Frontiers in neuroinformatics · 2009Article
- SenseLab: new developments in disseminating neuroscience information.Briefings in bioinformatics · 2007Article
- Advanced networks and computing in healthcare.Journal of the American Medical Informatics Association : JAMIAReview
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Authors and funding
3 authors.
Funding
Abstract
This paper describes NeuroExtract, a pilot system which facilitates the integrated retrieval of Internet-based information relevant to the neurosciences. The approach involved extracting descriptive metadata from the sources using domain-specific queries; retrieving, processing, and organizing the data into structured text files; searching the data files using text-based queries; and, providing the results in a Web page along with descriptions to entries and URL links to the original sources. NeuroExtract has been implemented for three bioscience resources, SWISSPROT, GEO, and PDB, which provide neuroscience-related information as sub-topics. We discuss several issues that arose in the course of NeuroExtract's implementation. This project is a first step in exploring how this general approach might be used, in conjunction with other query mediation approaches, to facilitate the integration of many Internet-accessible resources relevant to the neurosciences.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.