Evidence map›Paper›PMID 17328934›Full record

ArticleVirology2007

Tap and Dbp5, but not Gag, are involved in DR-mediated nuclear export of unspliced Rous sarcoma virus RNA.

Jason J LeBlanc, Sabena Uddowla, Benjamin Abraham, Sarah Clatterbuck, Karen L Beemon

Open access · greenAbstract read
In one paragraph

Article in Virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
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  12. Avian retroviral replication.Current opinion in virology · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jason J LeBlancDepartment of Biology, Johns Hopkins University, 3400 N. Charles Street, Baltimore, MD 21218, USA.
Sabena Uddowla
Benjamin Abraham
Sarah Clatterbuck
Karen L Beemon
Johns Hopkins University · US

Funding

CELLULAR AND MOLECULAR BIOLOGYT32GM007231 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VAN DOREN, MARK B · 1985 to 2020
$18.4M
RETROVIRAL REGULATORY SEQUENCES WITHIN CODING SEQUENCESR01CA048746 · NCI · JOHNS HOPKINS UNIVERSITY · PI BEEMON, KAREN L. · 1989 to 2014
$4.6M
NCI NIH HHS R01 CA048746NCI NIH HHS R01 CA48746NIGMS NIH HHS T32 GM007231NIGMS NIH HHS T32GM07231
6 · The paper itself

Abstract

All retroviruses must circumvent cellular restrictions on the export of unspliced RNAs from the nucleus. While the unspliced RNA export pathways for HIV and Mason-Pfizer monkey virus are well characterized, that of Rous sarcoma virus (RSV) is not. We have previously reported that the RSV direct repeat (DR) elements are involved in the cytoplasmic accumulation of unspliced viral RNA. Here, using fluorescent in situ hybridization (FISH), we demonstrate that unspliced viral RNAs bearing a single point mutation (G8863C) in the DR exhibit a restricted cellular localization in and around the nucleus. In contrast, wild type unspliced viral RNA had a diffuse localization throughout the nucleus and cytoplasm. Since the RSV Gag protein has a transient localization in the nucleus, we examined the effect of Gag over-expression on a DR-mediated reporter construct. While Gag did not enhance DR-mediated nuclear export, the dominant-negative expression of two cellular export factors, Tap and Dbp5, inhibited expression of the same reporter construct. Furthermore, FISH studies using the dominant-negative Dbp5 demonstrated that unspliced wild type RSV RNA was retained within the nucleus. Taken together, these results further implicate the DR in nuclear RNA export through interactions with Tap and Dbp5.

Indexed as

Gene Expression Regulation, ViralAnimalsCells, CulturedCytoplasmGene Products, gagMutationNucleocytoplasmic Transport ProteinsRepetitive Sequences, Nucleic AcidRNA SplicingRNA, ViralRous sarcoma virusSarcoma, AvianTranscription FactorsGene Products, gagNucleocytoplasmic Transport ProteinsRNA, ViralTranscription Factors

Identifiers

PMID17328934
PMCPMC2564995
OpenAlexW1967851213

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.