Evidence map›Paper›PMID 17327913›Full record

ArticlePloS one2007

Control of signaling in a MAP-kinase pathway by an RNA-binding protein.

Susanne Prinz, Christine Aldridge, Stephen A Ramsey, R James Taylor, Timothy Galitski

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Patterns and plasticity in RNA-protein interactions enable recruitment of multiple proteins through a single site.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  6. Article
  7. Article
  8. Genome-wide analysis of mRNA targets for Caenorhabditis elegans FBF, a conserved stem cell regulator.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  9. Article
  10. Article
  11. Article
  12. Replicative aging in yeast: the means to the end.Annual review of cell and developmental biology · 2008
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Susanne PrinzInstitute for Systems Biology, Seattle, Washington, United States of America.
Christine Aldridge
Stephen A Ramsey
R James Taylor
Timothy Galitski
Institute for Systems Biology · US

Funding

Quantitative Systems BiologyP50GM076547 · NIGMS · INSTITUTE FOR SYSTEMS BIOLOGY · PI BALIGA, NITIN S · 2006 to 2016
$30.6M
Systems Approach to Innate Immunity-Inflammation-SepsisU54AI054523 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ULEVITCH, RICHARD J · 2002 to 2006
$28.0M
NIAID NIH HHS U54 AI054523NIAID NIH HHS U54 AI054523RNIGMS NIH HHS P50 GM076547
6 · The paper itself

Abstract

Signaling-protein mRNAs tend to have long untranslated regions (UTRs) containing binding sites for RNA-binding proteins regulating gene expression. Here we show that a PUF-family RNA-binding protein, Mpt5, represses the yeast MAP-kinase pathway controlling differentiation to the filamentous form. Mpt5 represses the protein levels of two pathway components, the Ste7 MAP-kinase kinase and the Tec1 transcriptional activator, and negatively regulates the kinase activity of the Kss1 MAP kinase. Moreover, Mpt5 specifically inhibits the output of the pathway in the absence of stimuli, and thereby prevents inappropriate cell differentiation. The results provide an example of what may be a genome-scale level of regulation at the interface of signaling networks and protein-RNA binding networks.

Indexed as

Cell AdhesionCell ShapeDNA-Binding ProteinsFeedback, PhysiologicalGene Expression Regulation, FungalGenes, FungalMAP Kinase Signaling SystemMitogen-Activated Protein Kinase KinasesMitogen-Activated Protein KinasesPhenotypePhosphorylationProtein KinasesProtein Processing, Post-TranslationalRepressor ProteinsRNA-Binding ProteinsSaccharomyces cerevisiaeDNA-Binding ProteinsKSS1 protein, S cerevisiaeMitogen-Activated Protein Kinase KinasesMitogen-Activated Protein KinasesMPT5 protein, S cerevisiaeProtein KinasesRepressor ProteinsRNA-Binding ProteinsSaccharomyces cerevisiae ProteinsSTE12 protein, S cerevisiaeSTE7 protein, S cerevisiaeTEC1 protein, S cerevisiaeTranscription Factors

Identifiers

PMID17327913
PMCPMC1803019
OpenAlexW1978303592

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.