Evidence map›Paper›PMID 17326840›Full record

ArticleBMC cell biology2007

Tissue and subcellular distribution of CLIC1.

Barbara Ulmasov, Jonathan Bruno, Philip G Woost, John C Edwards

Open access · goldAbstract read
In one paragraph

Article in BMC cell biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Article
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  4. Intracellular chloride channel 1 and tumor.American journal of cancer research · 2023
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  9. Membrane Transport Proteins in Osteoclasts: The Ins and Outs.Frontiers in cell and developmental biology · 2021
    Review
  10. Review
  11. Article
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  14. Review
  15. Article
  16. Article
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  18. Article
  19. Anion Channels of Mitochondria.Handbook of experimental pharmacology · 2017
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Barbara UlmasovDepartment of Internal Medicine, St. Louis University, St. Louis MO, USA. bulmasov@slu.edu <bulmasov@slu.edu>
Jonathan Bruno
Philip G Woost
John C Edwards
University of North Carolina at Chapel Hill · USCase Western Reserve University · USSaint Louis University · US

Funding

VASOACTIVE HORMONES: RECEPTORS AND SIGNALING MECHANISMSP01HL041618 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI HOPFER, ULRICH · 1989 to 2004
$6.7M
The CLIC-1 Chloride Channel: Structure and FunctionR01DK060551 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI EDWARDS, JOHN C · 2003 to 2007
$1.1M
NHLBI NIH HHS HL-41618NHLBI NIH HHS P01 HL041618NIDDK NIH HHS R01 DK060551
6 · The paper itself

Abstract

backgroundCLIC1 is a chloride channel whose cellular role remains uncertain. The distribution of CLIC1 in normal tissues is largely unknown and conflicting data have been reported regarding the cellular membrane fraction in which CLIC1 resides.

resultsNew antisera to CLIC1 were generated and were found to be sensitive and specific for detecting this protein. These antisera were used to investigate the distribution of CLIC1 in mouse tissue sections and three cultured cell lines. We find CLIC1 is expressed in the apical domains of several simple columnar epithelia including glandular stomach, small intestine, colon, bile ducts, pancreatic ducts, airway, and the tail of the epididymis, in addition to the previously reported renal proximal tubule. CLIC1 is expressed in a non-polarized distribution in the basal epithelial cell layer of the stratified squamous epithelium of the upper gastrointesitinal tract and the basal cells of the epididymis, and is present diffusely in skeletal muscle. Distribution of CLIC1 was examined in Panc1 cells, a relatively undifferentiated, non-polarized human cell line derived from pancreatic cancer, and T84 cells, a human colon cancer cell line which can form a polarized epithelium that is capable of regulated chloride transport. Digitonin extraction was used to distinguish membrane-inserted CLIC1 from the soluble cytoplasmic form of the protein. We find that digitonin-resistant CLIC1 is primarily present in the plasma membrane of Panc1 cells. In T84 cells, we find digitonin-resistant CLIC1 is present in an intracellular compartment which is concentrated immediately below the apical plasma membrane and the extent of apical polarization is enhanced with forskolin, which activates transepithelial chloride transport and apical membrane traffic in these cells. The sub-apical CLIC1 compartment was further characterized in a well-differentiated mouse renal proximal tubule cell line. The distribution of CLIC1 was found to overlap that of megalin and the sodium-phosphate cotransporter, NaPi-II, which are markers of the apical endocytic/recycling compartment in proximal tubule.

conclusionThe cell and tissue specific patterns of CLIC1 expression suggest it may play distinct roles in different cell types. In certain polarized columnar epithelia, it may play a role in apical membrane recycling.

Indexed as

AnimalsAntibodiesCell MembraneCells, CulturedChloride ChannelsHeLa CellsHumansImmunohistochemistryKidney Tubules, ProximalMiceTissue DistributionAntibodiesChloride ChannelsCLIC1 protein, human

Identifiers

PMID17326840
PMCPMC1820597
OpenAlexW2117892269

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.