ArticleBMC plant biology2007
Characterization and transferability of microsatellite markers of the cultivated peanut (Arachis hypogaea).
Article in BMC plant biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed.
- A slow march along the South American Dry Diagonal: a multi-gene molecular phylogeny and biogeographical history of the peanut genus, Arachis L.Annals of botany · 2025Article
- Development of SSR markers and identification of major quantitative trait loci controlling shelling percentage in cultivated peanut (Arachis hypogaea L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Co-localization of major quantitative trait loci for pod size and weight to a 3.7 cM interval on chromosome A05 in cultivated peanut (Arachis hypogaea L.).BMC genomics · 2017Article
- In silico development and characterization of tri-nucleotide simple sequence repeat markers in hazelnut (Corylus avellana L.).PloS one · 2017Article
- Identification of major QTLs underlying tomato spotted wilt virus resistance in peanut cultivar Florida-EP(TM) '113'.BMC genetics · 2016Article
- Quantitative trait locus analysis of agronomic and quality-related traits in cultivated peanut (Arachis hypogaea L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015Article
- Article
- Exploring genetic variability within lentil (Lens culinaris Medik.) and across related legumes using a newly developed set of microsatellite markers.Molecular biology reports · 2014Article
- Expanding the repertoire of microsatellite markers for polymorphism studies in Indian accessions of mung bean (Vigna radiata L. Wilczek).Molecular biology reports · 2014Article
- Genetic diversity and population structure of the major peanut (Arachis hypogaea L.) cultivars grown in China by SSR markers.PloS one · 2014Article
- Development and characterization of microsatellite markers for Morus spp. and assessment of their transferability to other closely related species.BMC plant biology · 2013Article
- A study of the relationships of cultivated peanut (Arachis hypogaea) and its most closely related wild species using intron sequences and microsatellite markers.Annals of botany · 2013Article
- A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut.BMC genomics · 2012Article
- Characterization and compilation of polymorphic simple sequence repeat (SSR) markers of peanut from public database.BMC research notes · 2012Article
- Large-scale development of expressed sequence tag-derived simple sequence repeat markers and diversity analysis in Arachis spp.Molecular breeding : new strategies in plant improvement · 2012Article
- Fostered and left behind alleles in peanut: interspecific QTL mapping reveals footprints of domestication and useful natural variation for breeding.BMC plant biology · 2012Article
- Development and characterization of highly polymorphic long TC repeat microsatellite markers for genetic analysis of peanut.BMC research notes · 2012Article
- Article
- Phylogenetic relationships in genus Arachis based on ITS and 5.8S rDNA sequences.BMC plant biology · 2010Article
- Genetic relationships among seven sections of genus Arachis studied by using SSR markers.BMC plant biology · 2010Article
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5 authors.
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Abstract
backgroundThe genus Arachis includes Arachis hypogaea (cultivated peanut) and wild species that are used in peanut breeding or as forage. Molecular markers have been employed in several studies of this genus, but microsatellite markers have only been used in few investigations. Microsatellites are very informative and are useful to assess genetic variability, analyze mating systems and in genetic mapping. The objectives of this study were to develop A. hypogaea microsatellite loci and to evaluate the transferability of these markers to other Arachis species.
resultsThirteen loci were isolated and characterized using 16 accessions of A. hypogaea. The level of variation found in A. hypogaea using microsatellites was higher than with other markers. Cross-transferability of the markers was also high. Sequencing of the fragments amplified using the primer pair Ah11 from 17 wild Arachis species showed that almost all wild species had similar repeated sequence to the one observed in A. hypogaea. Sequence data suggested that there is no correlation between taxonomic relationship of a wild species to A. hypogaea and the number of repeats found in its microsatellite loci.
conclusionThese results show that microsatellite primer pairs from A. hypogaea have multiple uses. A higher level of variation among A. hypogaea accessions can be detected using microsatellite markers in comparison to other markers, such as RFLP, RAPD and AFLP. The microsatellite primers of A. hypogaea showed a very high rate of transferability to other species of the genus. These primer pairs provide important tools to evaluate the genetic variability and to assess the mating system in Arachis species.
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