Evidence map›Paper›PMID 17310272›Full record

ArticleExtremophiles : life under extreme conditions2007

Intrinsic halotolerance of the psychrophilic alpha-amylase from Pseudoalteromonas haloplanktis.

Soundararajan Srimathi, Gurunathan Jayaraman, Georges Feller, Bengt Danielsson, Paranji R Narayanan

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Article in Extremophiles : life under extreme conditions, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
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  3. Genomic signatures of cold adaptation in the family Colwelliaceae.Extremophiles : life under extreme conditions · 2024
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4 · The record

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5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Soundararajan SrimathiDepartment of Microbiology, Tuberculosis Research Centre, Mayor Ramanathan Road, Chetput, Chennai, 600 031, India. srimathi_matoria@yahoo.com
Gurunathan Jayaraman
Georges Feller
Bengt Danielsson
Paranji R Narayanan
National Institute of Research in Tuberculosis · INLund University · SEUniversity of Liège · BEVoluntary Health Services Hospital · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The halotolerance of a cold adapted alpha-amylase from the psychrophilic bacterium Pseudoalteromonas haloplanktis (AHA) was investigated. AHA exhibited hydrolytic activity over a broad range of NaCl concentrations (0.01-4.5 M). AHA showed 28% increased activity in 0.5-2.0 M NaCl compared to that in 0.01 M NaCl. In contrast, the corresponding mesophilic (Bacillus amyloliquefaciens) and thermostable (B. licheniformis) alpha-amylases showed a 39 and 46% decrease in activity respectively. Even at 4.5 M NaCl, 80% of the initial activity was detected for AHA, whereas the mesophilic and thermostable enzymes were inactive. Besides an unaltered fluorescence emission and secondary structure, a 10 degrees C positive shift in the temperature optimum, a stabilization factor of >5 for thermal inactivation and a Delta T(m) of 8.3 degrees C for the secondary structure melting were estimated in 2.7 M NaCl. The higher activation energy, half-life time and T(m) indicated reduced conformational dynamics and increased rigidity in the presence of higher NaCl concentrations. A comparison with the sequences of other halophilic alpha-amylases revealed that AHA also contains higher proportion of small hydrophobic residues and acidic residues resulting in a higher negative surface potential. Thus, with some compromise in cold activity, psychrophilic adaptation has also manifested halotolerance to AHA that is comparable to the halophilic enzymes.

Indexed as

Adaptation, Physiologicalalpha-AmylasesCatalysisCircular DichroismHalogensHydrolysisKineticsProtein Structure, SecondaryProtein Structure, TertiaryPseudoalteromonasSpectrometry, FluorescenceSpectrophotometry, Ultravioletalpha-AmylasesHalogens

Identifiers

PMID17310272
OpenAlexW2123394966

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.