Evidence map›Paper›PMID 17310252›Full record

ArticleNature structural & molecular biology2007

The gene encoding the splicing factor SF2/ASF is a proto-oncogene.

Rotem Karni, Elisa de Stanchina, Scott W Lowe, Rahul Sinha, David Mu, Adrian R Krainer

Registry-linked trialAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06315868 (Breast Cancer Subtype Characterization Through Patient's Derived Organoids".), which is not on this map. Cited by 559 papers.

0numbers the graph read from it
0cells of the map it votes in
559citing papers in PubMed
20.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06315868 recruitingnot on this mapstarted 2023, after this paper: background citation

Breast Cancer Subtype Characterization Through Patient's Derived Organoids". (BCinsightPDO)

Typeobservational_patient_registrySponsorFondazione Policlinico Universitario Agostino Gemelli IRCCSRan2023 to 2027Enrolled306ConditionsBreast Cancer, Organoids
3 · Its place in the literature

Who cites it

559 citing papers in PubMed, 933 citations in OpenAlex.

  1. SRSF3 plays a key role in liver cancer sex disparity by facilitating hepatocyte expression of ERα and FOXA.Proceedings of the National Academy of Sciences of the United States of America · 2026
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499 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Rotem KarniCold Spring Harbor Laboratory, PO Box 100, Cold Spring Harbor, New York 11724, USA.
Elisa de Stanchina
Scott W Lowe
Rahul Sinha
David Mu
Adrian R Krainer
Cold Spring Harbor Laboratory · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
VIRAL TRANSACTIVATIONP01CA013106 · NCI · COLD SPRING HARBOR LABORATORY · PI William Richard McCombie · 1985 to 2026
$116.8M
NCI NIH HHS CA13106NCI NIH HHS P01 CA013106NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Alternative splicing modulates the expression of many oncogene and tumor-suppressor isoforms. We have tested whether some alternative splicing factors are involved in cancer. We found that the splicing factor SF2/ASF is upregulated in various human tumors, in part due to amplification of its gene, SFRS1. Moreover, slight overexpression of SF2/ASF is sufficient to transform immortal rodent fibroblasts, which form sarcomas in nude mice. We further show that SF2/ASF controls alternative splicing of the tumor suppressor BIN1 and the kinases MNK2 and S6K1. The resulting BIN1 isoforms lack tumor-suppressor activity; an isoform of MNK2 promotes MAP kinase-independent eIF4E phosphorylation; and an unusual oncogenic isoform of S6K1 recapitulates the transforming activity of SF2/ASF. Knockdown of either SF2/ASF or isoform-2 of S6K1 is sufficient to reverse transformation caused by the overexpression of SF2/ASF in vitro and in vivo. Thus, SF2/ASF can act as an oncoprotein and is a potential target for cancer therapy.

Indexed as

Alternative SplicingAnimalsApoptosisCell ProliferationCell Transformation, NeoplasticEukaryotic Initiation Factor-4EGene Expression ProfilingGene Expression Regulation, NeoplasticHeLa CellsHumansMiceMice, NudeNeoplasmsNIH 3T3 CellsNuclear ProteinsPhosphorylationEukaryotic Initiation Factor-4EMAS1 protein, humanNuclear ProteinsProtein IsoformsProto-Oncogene Masribosomal protein S6 kinase, 70kD, polypeptide 1Ribosomal Protein S6 Kinases, 70-kDaRNA-Binding ProteinsSerine-Arginine Splicing Factors

Identifiers

PMID17310252
PMCPMC4595851
OpenAlexW1970108031

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.