Evidence map›Paper›PMID 17307197›Full record

ArticleJournal of immunological methods2007

Generation of polyclonal antiserum for the detection of methylarginine proteins.

Peng Duan, Ye Xu, Barbara Birkaya, Jason Myers, Michel Pelletier, Laurie K Read, Corrado Guarnaccia, Sandor Pongor, Robert B Denman, John M Aletta

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of immunological methods, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Peng DuanCenter for Neuroscience, Department of Pharmacology and Toxicology, University at Buffalo School of Medicine and Biomedical Sciences (102 Farber Hall) 3435 Main Street Buffalo, New York 14214-3000, USA.
Ye Xu
Barbara Birkaya
Jason Myers
Michel Pelletier
Laurie K Read
Corrado Guarnaccia
Sandor Pongor
Robert B Denman
John M Aletta
University at Buffalo, State University of New York · USInternational Centre for Genetic Engineering and Biotechnology · IT

Funding

Protein Arginine Methylation in TrypanosomesR01AI060260 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI READ, LAURIE K. · 2003 to 2014
$3.3M
ROLE OF PROTEIN METHYLATION IN NEURITE OUTGROWTHR01NS040533 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI ALETTA, JOHN MICHAEL · 2000 to 2002
$679k
Protein Arginine Methylation in TrypanosomesR56AI060260 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI READ, LAURIE K. · 2009 to 2009
$381k
NIAID NIH HHS AI060260NIAID NIH HHS R01 AI060260NIAID NIH HHS R56 AI060260NINDS NIH HHS NS40533NINDS NIH HHS R01 NS040533
6 · The paper itself

Abstract

This report describes an approach for the study of the biology of methylarginine proteins based on the generation of immunological reagents capable of recognizing the methylarginine status of cellular proteins. Two forms of an immunizing peptide were prepared based upon an amino acid sequence motif found most prevalently among verified dimethylarginine-containing proteins. One form of the peptide was constructed with 7 arginine residues alternating with 8 glycine residues. None of the arginines used in the synthesis were methylated. The alternative form of the peptide was synthesized with the identical repeating GRG sequence, but with asymmetrical dimethylarginine at each arginine residue. A methylarginine-specific antiserum was generated using the latter peptide. ELISA and western blotting of glycine arginine-rich peptides, each synthesized with or without asymmetric dimethylarginine, demonstrate the methyl specificity of the antiserum. The methylarginine-specific antibody co-localizes with the highly methylated native nucleolin protein conspicuously concentrated in the nucleolus. The methylarginine-specific antiserum recognizes a GRG peptide and bacterially expressed RBP16 only after incubation of the peptide or RBP16 with recombinant protein arginine methyltransferase 1, or cell extracts, respectively. Proteins isolated from cells in different developmental states exhibit different patterns of reactivity observed by western blots. Finally, the methylarginine-specific reagent interacts specifically with the methylarginine of cellular hnRNPA1 and human fragile X mental retardation protein expressed in cultured PC12 cells. An immunological reagent capable of detecting the methylarginine status of cellular methylproteins will facilitate the cellular and molecular analysis of protein arginine methylation in a wide variety of research and biomedical applications.

Indexed as

Antibody SpecificityAmino Acid SequenceAnimalsAntibodiesArginineFragile X Messenger Ribonucleoprotein 1MethylationMolecular Sequence DataNerve Growth FactorsPC12 CellsPeptidesProteinsRatsAntibodiesArginineFragile X Messenger Ribonucleoprotein 1Nerve Growth FactorsPeptidesProteins

Identifiers

PMID17307197
PMCPMC1950451
OpenAlexW2148522601

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.