Evidence map›Paper›PMID 17306030›Full record

ArticleJournal of inflammation (London, England)2007

A dynamic model of gene expression in monocytes reveals differences in immediate/early response genes between adult and neonatal cells.

Shelley Lawrence, Yuhong Tang, M Barton Frank, Igor Dozmorov, Kaiyu Jiang, Yanmin Chen, Craig Cadwell, Sean Turner, Michael Centola, James N Jarvis

Open access · goldAbstract read
In one paragraph

Article in Journal of inflammation (London, England), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Shelley Lawrence *Dept. of Pediatrics, Neonatal Section, University of Oklahoma College of Medicine, Oklahoma City, OK, USA.
Yuhong Tang *Arthritis & Immunology Program Oklahoma Medical Research Foundation, Oklahoma City, 73104, USA.
M Barton FrankArthritis & Immunology Program Oklahoma Medical Research Foundation, Oklahoma City, 73104, USA.
Igor DozmorovArthritis & Immunology Program Oklahoma Medical Research Foundation, Oklahoma City, 73104, USA.
Kaiyu JiangDept. of Pediatrics, Neonatal Section, University of Oklahoma College of Medicine, Oklahoma City, OK, USA.
Yanmin ChenDept. of Pediatrics, Neonatal Section, University of Oklahoma College of Medicine, Oklahoma City, OK, USA.
Craig CadwellArthritis & Immunology Program Oklahoma Medical Research Foundation, Oklahoma City, 73104, USA.
Sean TurnerArthritis & Immunology Program Oklahoma Medical Research Foundation, Oklahoma City, 73104, USA.
Michael CentolaArthritis & Immunology Program Oklahoma Medical Research Foundation, Oklahoma City, 73104, USA.
James N JarvisDept. of Pediatrics, Neonatal Section, University of Oklahoma College of Medicine, Oklahoma City, OK, USA.
Oklahoma Medical Research Foundation · USUniversity of Oklahoma · US

Funding

UNDERSTANDING THE ROLE OF RETINOL DEHYDROGENASES RDH11 AND RDH12 IN VISIONP20RR017703 · NCRR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI ASH, JOHN D · 2002 to 2011
$23.6M
THE EFFECTS OF ERK PATHWAY INHIBITION ON DNA METHYLATION IN SLEP20RR015577 · NCRR · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI CENTOLA, MICHAEL B · 2000 to 2009
$21.5M
VALIDATING NOVEL GENES IMPLICATED IN LEUKOCYTE CHEMOTAXISP20RR020143 · NCRR · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI KAUFMAN, KENNETH M · 2004 to 2011
$21.0M
Trt. of Primary Hyperaldosteronism w/ACE Inhibitors &Angiotension Rec. BlockersM01RR014467 · NCRR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI ANDREWS, MITCHELL DEWAYNE · 2001 to 2007
$10.4M
SNP Confirmation and High Throughput Genotyping CoreP30AR053483 · NIAMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI CHAKRAVARTY, ELIZA F · 2007 to 2017
$6.7M
NCRR NIH HHS M01 RR014467NCRR NIH HHS P20 RR015577NCRR NIH HHS P20 RR017703NCRR NIH HHS P20 RR020143NIAMS NIH HHS P30 AR053483
6 · The paper itself

Abstract

Neonatal monocytes display immaturity of numerous functions compared with adult cells. Gene expression arrays provide a promising tool for elucidating mechanisms underlying neonatal immune function. We used a well-established microarray to analyze differences between LPS-stimulated human cord blood and adult monocytes to create dynamic models for interactions to elucidate observed deficiencies in neonatal immune responses. We identified 168 genes that were differentially expressed between adult and cord monocytes after 45 min incubation with LPS. Of these genes, 95% (159 of 167) were over-expressed in adult relative to cord monocytes. Differentially expressed genes could be sorted into nine groups according to their kinetics of activation. Functional modelling suggested differences between adult and cord blood in the regulation of apoptosis, a finding confirmed using annexin binding assays. We conclude that kinetic studies of gene expression reveal potentially important differences in gene expression dynamics that may provide insight into neonatal innate immunity.

Identifiers

PMID17306030
PMCPMC1803772
OpenAlexW1824049661

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.