Evidence map›Paper›PMID 17303794›Full record

ArticleAmerican journal of respiratory and critical care medicine2007

Ethnicity-specific gene-gene interaction between IL-13 and IL-4Ralpha among African Americans with asthma.

Natalie C Battle, Shweta Choudhry, Hui-Ju Tsai, Celeste Eng, Gunjan Kumar, Kenneth B Beckman, Mariam Naqvi, Kelley Meade, H George Watson, Michael Lenoir and 2 more

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 7 pooled it
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 7 syntheses or guidelines pooled it, 81 citations in OpenAlex.

  1. Pooled it
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  8. Article
  9. Molecular biology research communications · 2025
    Article
  10. Review
  11. Article
  12. Chronic itch in African Americans: an unmet need.Archives of dermatological research · 2022
    Review
  13. Unraveling racial disparities in asthma emergency department visits using electronic healthcare records and machine learning.The Journal of asthma : official journal of the Association for the Care of Asthma · 2022
    Article
  14. Comparison of severity of asthma hospitalization between African American and Hispanic children in the Bronx.The Journal of asthma : official journal of the Association for the Care of Asthma · 2020
    Article
  15. Science advances · 2020
    Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Natalie C BattleUniversity of California, San Francisco, San Francisco, CA 94143-2911, USA.
Shweta Choudhry
Hui-Ju Tsai
Celeste Eng
Gunjan Kumar
Kenneth B Beckman
Mariam Naqvi
Kelley Meade
H George Watson
Michael Lenoir
Esteban González Burchard
SAGE Investigators
University of California, San Francisco · USOaklands Hospital · GBKIPP Bay Area Schools · USWatson Clinic · US

Funding

PHARMACOGENETICS OF MEMBRANE TRANSPORTERSU01GM061390 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GIACOMINI, KATHLEEN M · 2000 to 2009
$29.2M
ZIDOVUDINE &LAMIVUDINE &NEVIRAPINE COMBINATION THERAPY IN HIV 1 INFM01RR001271 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KESSLER, DAVID A · 1985 to 2006
$22.7M
Pharmacogenomics of Membrane TransportersU19GM061390 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WITTE, JOHN S. · 2010 to 2014
$16.3M
Case-control Association Studies and Genetic ConfoundingR01HL078885 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BURCHARD, ESTEBAN GONZALEZ · 2005 to 2009
$1.9M
Genetics of Asthma In Latino AmericansK23HL004464 · NHLBI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI BURCHARD, ESTEBAN GONZALEZ · 2001 to 2005
$609k
NCRR NIH HHS M01 RR01271NHLBI NIH HHS HL07185NHLBI NIH HHS HL078885NHLBI NIH HHS K23 HL04464NIGMS NIH HHS GM61390
6 · The paper itself

Abstract

rationaleGenes in the interleukin (IL)-4/IL-13/IL-4Ralpha pathway have been shown to be associated with asthma and related phenotypes in some populations, but not in others. Furthermore, interaction between these genes has been shown to affect asthma in white and Chinese populations.

objectivesTo determine whether there are IL-4/IL-13 and IL-4Ralpha gene-gene interactions that are associated with asthma in African Americans.

methodsEighteen single-nucleotide polymorphisms (SNPs) in IL-4, IL-13, and IL-4Ralpha genes were genotyped in 264 African Americans with asthma and 176 healthy control subjects. We tested the SNPs for genetic associations and gene-gene interactions with asthma, baseline lung function, bronchodilator drug response, and total serum IgE levels. MEASUREMENTS AND MAIN

resultsWe identified 94 SNPs in IL-4, IL-13, and IL-4Ralpha genes by directly sequencing these genes in 24 African-American subjects with asthma. Seventeen SNPs were analyzed for association with asthma and related phenotypes. We found no evidence of association in the IL-4 gene. One SNP in the IL-13 gene (A-646G, rs2069743) and two SNPs in the IL-4Ralpha gene (A+4679G, rs1805010, and C+22656T, rs1805015) showed association with lung function (both baseline and post-bronchodilator). Although the association between individual SNPs and asthma-related phenotypes differed from previous studies performed in white and Chinese populations, significant gene-gene interaction was found between the IL-13 (A-646G) and IL-4Ralpha (A+4679G) SNPs for baseline lung function among African-American subjects with asthma.

conclusionsGene-gene interaction between the IL-13 and IL-4Ralpha genes may play an important role in asthma among African Americans.

Indexed as

AdolescentAdultAsthmaBlack or African AmericanCase-Control StudiesChildFemaleForced Expiratory VolumeGenotypeHumansInterleukin-13Interleukin-4Interleukin-4 Receptor alpha SubunitMalePolymorphism, Single NucleotideInterleukin-13Interleukin-4Interleukin-4 Receptor alpha Subunit

Identifiers

PMID17303794
PMCPMC1899298
OpenAlexW2013710564

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.