Evidence map›Paper›PMID 17303642›Full record

ArticleThe Journal of physiology2007

Subunit-specific mechanisms and proton sensitivity of NMDA receptor channel block.

Shashank M Dravid, Kevin Erreger, Hongjie Yuan, Katherine Nicholson, Phuong Le, Polina Lyuboslavsky, Antoine Almonte, Ernest Murray, Cara Mosely, Jeremy Barber and 4 more

Open access · greenAbstract readComparative Study
In one paragraph

Article in The Journal of physiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 177 citations in OpenAlex.

  1. Trial
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Effects of NMDA receptor antagonists on working memory and gamma oscillations, and the mediating role of the GluN2D subunit.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2025
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Frontiers in neuroscience · 2025
    Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Review

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Shashank M DravidDepartment of Pharmacology, Emory University School of Medicine, Rollins Research Centre, 1510 Clifton Road, Atlanta, GA 30322-3090, USA. smdravid@pharm.emory.edu
Kevin Erreger
Hongjie Yuan
Katherine Nicholson
Phuong Le
Polina Lyuboslavsky
Antoine Almonte
Ernest Murray
Cara Mosely
Jeremy Barber
Adam French
Robert Balster
Thomas F Murray
Stephen F Traynelis
Emory University · USCreighton University · USVanderbilt University · USVirginia Commonwealth University · US

Funding

THE BEHAVIORAL PHARMACOLOGY OF PHENCYCLIDINER01DA001442 · NIDA · VIRGINIA COMMONWEALTH UNIVERSITY · PI BALSTER, ROBERT L · 1985 to 2010
$4.4M
NIDA NIH HHS DA-07218NIDA NIH HHS R01 DA001442NINDS NIH HHS R01-NS36777PHS HHS R01-01442
6 · The paper itself

Abstract

We have compared the potencies of structurally distinct channel blockers at recombinant NR1/NR2A, NR1/NR2B, NR1/NR2C and NR1/NR2D receptors. The IC50 values varied with stereochemistry and subunit composition, suggesting that it may be possible to design subunit-selective channel blockers. For dizocilpine (MK-801), the differential potency of MK-801 stereoisomers determined at recombinant NMDA receptors was confirmed at native receptors in vitro and in vivo. Since the proton sensor is tightly linked both structurally and functionally to channel gating, we examined whether blocking molecules that interact in the channel pore with the gating machinery can differentially sense protonation of the receptor. Blockers capable of remaining trapped in the pore during agonist unbinding showed the strongest dependence on extracellular pH, appearing more potent at acidic pH values that promote channel closure. Determination of pK(a) values for channel blockers suggests that the ionization of ketamine but not of other blockers can influence its pH-dependent potency. Kinetic modelling and single channel studies suggest that the pH-dependent block of NR1/NR2A by (-)MK-801 but not (+)MK-801 reflects an increase in the MK-801 association rate even though protons reduce channel open probability and thus MK-801 access to its binding site. Allosteric modulators that alter pH sensitivity alter the potency of MK-801, supporting the interpretation that the pH sensitivity of MK-801 binding reflects the changes at the proton sensor rather than a secondary effect of pH. These data suggest a tight coupling between the proton sensor and the ion channel gate as well as unique subunit-specific mechanisms of channel block.

Indexed as

ProtonsAnimalsCell LineDizocilpine MaleateElectrophysiologyExcitatory Amino Acid AntagonistsHumansHydrogen-Ion ConcentrationIon Channel GatingIon ChannelsMaleMiceMice, Inbred C57BLPatch-Clamp TechniquesRatsRats, Sprague-DawleyDizocilpine MaleateExcitatory Amino Acid AntagonistsIon ChannelsProtonsReceptors, N-Methyl-D-AspartateRecombinant Proteins

Identifiers

PMID17303642
PMCPMC2075223
OpenAlexW1606744897

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.